当前解析结果
SmilChr03G004671| 统一新 Gene ID | SmilChr03G004671 |
|---|---|
| 名称 | SmilChr03G004671 |
| 描述 | uncharacterized SmilChr03G004671 |
| 染色体 / SeqID | Chr03 / NC_080389.1 |
| 坐标与链方向 | 64166559 - 64168856 / + |
| NCBI Gene ID | LOC131015509 |
|---|---|
| GeneID | 131015509 |
| locus_tag | - |
| NCBI Name | LOC131015509 |
| 原始查询 | SmilChr03G004671 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os08g0459300; species=rice; confidence=high |
| 产物 | hit=Os08g0459300; species=rice; confidence=high |
| Arabidopsis | AT1G02180 (AT1G02180)ferredoxin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:839543] identity=45.6; qcov=0.754; evalue=8.09e-47; confidence=medium |
| Rice | Os08g0459300- identity=58.6; qcov=0.884; evalue=1.48e-75; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131015509 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057799896.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057799896.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057799896.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057799896.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057799896.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr3:64168123 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B38,B39,C13,C38,C44 |
Chr3:64168145 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B77,B82 |
Chr3:64168186 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B86,C17,C46,C74 |
Chr3:64168289 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C14 |
Chr3:64168313 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B77,B82 |
Chr3:64168409 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B2,B52,B57 |
Chr3:64168502 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C32,C68,C78 |
Chr3:64168550 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B19 |
Chr3:64168577 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A1,B32,B69,C78 |
Chr3:64168634 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B27,B98,C33,D10,D4 |
Chr3:64168645 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B72 |
Chr3:64168652 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B61,B83,C59 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。