Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G004688`

染色体: Chr03 坐标: 64270109-64272806 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G004688`
名称	SmilChr03G004688
描述	adenine nucleotide transporter BT1, chloroplastic/mitochondrial-like
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	64270109 - 64272806 / `-`

ID 对照

NCBI Gene ID	`LOC131015529`
GeneID	`131015529`
locus_tag	`-`
NCBI Name	`LOC131015529`
原始查询	`SmilChr03G004688`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	adenine nucleotide transporter BT1, chloroplastic/mitochondrial-like
产物	adenine nucleotide transporter BT1%2C chloroplastic/mitochondrial-like
Arabidopsis	`AT4G32400` (SHS1) Mitochondrial substrate carrier family protein [Source:NCBI gene (formerly Entrezgene);Acc:829375] identity=66; qcov=0.979; evalue=1.45e-172; confidence=high
Rice	`Os06g0602700` (BT1-3) - identity=63.5; qcov=1.01; evalue=1.28e-172; confidence=high
GO	GO:0055085 (transmembrane transport)
KEGG	-
Pfam	PF00153 (Mito_carr)
InterPro	-
eggNOG	-
NR	GeneID:131015529

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast membrane	叶绿体膜	0.80000	`XP_057799917.1`
2	Chloroplast	叶绿体	0.60000	`XP_057799917.1`
3	Mitochondrion	线粒体	0.40000	`XP_057799917.1`
4	Mitochondrion membrane	线粒体膜	0.20000	`XP_057799917.1`
5	Mitochondrion inner membrane	线粒体内膜	0.20000	`XP_057799917.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:64270336`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B108,B45,C72
`Chr3:64270373`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr3:64270421`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B74,C16,C26,C34
`Chr3:64270454`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A7,B124,B40
`Chr3:64270490`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B104,B139
`Chr3:64270519`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B117
`Chr3:64270549`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A2,C59
`Chr3:64270550`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B104,B139
`Chr3:64270699`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B82
`Chr3:64270708`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B30,B53,C28
`Chr3:64270715`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B22
`Chr3:64270717`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057799917.1

387 aa

194

387

Mito_carr

PF00153 Mito_carr 103-188 aa PF00153 Mito_carr 200-283 aa PF00153 Mito_carr 292-382 aa

XP_057799918.1

387 aa

194

387

Mito_carr

PF00153 Mito_carr 103-188 aa PF00153 Mito_carr 200-283 aa PF00153 Mito_carr 292-382 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057799917.1`	Pfam	`PF00153`	Mito_carr	Repeat	103	188	9.7e-76	250.3	Mitochondrial carrier protein
`XP_057799917.1`	Pfam	`PF00153`	Mito_carr	Repeat	200	283	9.7e-76	250.3	Mitochondrial carrier protein
`XP_057799917.1`	Pfam	`PF00153`	Mito_carr	Repeat	292	382	9.7e-76	250.3	Mitochondrial carrier protein
`XP_057799918.1`	Pfam	`PF00153`	Mito_carr	Repeat	103	188	9.7e-76	250.3	Mitochondrial carrier protein
`XP_057799918.1`	Pfam	`PF00153`	Mito_carr	Repeat	200	283	9.7e-76	250.3	Mitochondrial carrier protein
`XP_057799918.1`	Pfam	`PF00153`	Mito_carr	Repeat	292	382	9.7e-76	250.3	Mitochondrial carrier protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057943935.1
AAATTAATTAAAATTTGCTCAAGGGTTGAAAAGAGGAAGAACAGCGTATCACCTCCGCCACCCTCTCTCTCTCACTCTCTCTCTCTCTTCAACAAAAACAAGCTCCGCCTCCACAACAATCTCAAGCCCAAGCTAAACTCAGCTCCTACATAGCTTATTTATTAGCATTGTATTGCAACAGTGAGATTAATTACTTCTCACTCCTAATGTTTTTATTTTCTTGCAAAATATTAAATTGTTTATATTAATCTCTCCTTCTC...

XM_057943934.1
TGCTCAAGGGTTGAAAAGAGGAAGAACAGCGTATCACCTCCGCCACCCTCTCTCTCTCACTCTCTCTCTCTCTTCAACAAAAACAAGCTCCGCCTCCACAACAATCTCAAGCCCAAGCTAAACTCAGCTCCTACATAGCTTATTTATTAGCATTGTATTGCAACATTTTCCGCTTGAAGCATTATTCCCTTTTCACCTTTCTCATATTCCAAAGCTGAATTGTATTGAGTTTTAGAGAGAGAGGGAAGGTGCTATTGAAT...

CDS

2 records

下载 CDS FASTA

LOC131015529
ATGAGTGTAAAAATGCAATCTTTGGAGTTCAATAAAAAAGGGCTTTCCTCATCGAATTCCAATTTAGGGCTTCAATGGAATCTCCAAGATTGCAATTTTTACCCAGGTGGTGGGCTGTTTGCCTCTGTTTCTCAAATGGGAAACAATGAAAATGGTGGTTTCAAATTGCCCTATGCTGATTTGCTGGTGAAGTATGTCTCATTGCCTGAGGGGTTCAAGACTCTAGGTTTGTCTGAGGAGGAGAGTGAGTTGGTGGATAG...

Protein

2 records

下载 Protein FASTA

XP_057799917.1
MSVKMQSLEFNKKGLSSSNSNLGLQWNLQDCNFYPGGGLFASVSQMGNNENGGFKLPYADLLVKYVSLPEGFKTLGLSEEESELVDSKKKNKGLKLKIKVSNPSLRRLISGGIAGAVSRTAVAPLETIRTHLMVGSSGNSSTEVFQNIMQSEGWKGLFRGNFVNVIRVAPSKAIELFVYDTVNRNLSSKPGEQQRLLVPPSLVAGACAGVSSTLITYPLELVKTRLTIQRGVYNGLFDAFVKIFEEGGLPELYRGLTPSL...

XP_057799918.1
MSVKMQSLEFNKKGLSSSNSNLGLQWNLQDCNFYPGGGLFASVSQMGNNENGGFKLPYADLLVKYVSLPEGFKTLGLSEEESELVDSKKKNKGLKLKIKVSNPSLRRLISGGIAGAVSRTAVAPLETIRTHLMVGSSGNSSTEVFQNIMQSEGWKGLFRGNFVNVIRVAPSKAIELFVYDTVNRNLSSKPGEQQRLLVPPSLVAGACAGVSSTLITYPLELVKTRLTIQRGVYNGLFDAFVKIFEEGGLPELYRGLTPSL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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