Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr03G004728`

染色体: Chr03 坐标: 64455829-64458642 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr03G004728`
名称	SmilChr03G004728
描述	uncharacterized transporter C405.03c
染色体 / SeqID	Chr03 / NC_080389.1
坐标与链方向	64455829 - 64458642 / `+`

ID 对照

NCBI Gene ID	`LOC131015571`
GeneID	`131015571`
locus_tag	`-`
NCBI Name	`LOC131015571`
原始查询	`SmilChr03G004728`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog
描述	EamA-like transporter family [Source:NCBI gene (formerly Entrezgene);Acc:829346]; symbol=AT4G32140; hit=AT4G32140; species=arabidopsis; confidence=high
产物	EamA-like transporter family [Source:NCBI gene (formerly Entrezgene);Acc:829346]; symbol=AT4G32140; hit=AT4G32140; species=arabidopsis; confidence=high
Arabidopsis	`AT4G32140` (AT4G32140) EamA-like transporter family [Source:NCBI gene (formerly Entrezgene);Acc:829346] identity=73.3; qcov=1.02; evalue=2.32e-179; confidence=high
Rice	`Os04g0645600` - identity=66.7; qcov=1.03; evalue=1.7e-167; confidence=high
GO	GO:0016020 (membrane); GO:0090087 (regulation of peptide transport)
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131015571

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole	液泡	1.00000	`XP_057799980.1`
2	Vacuole membrane	液泡膜	1.00000	`XP_057799980.1`
3	Nucleus	细胞核	0.00000	`XP_057799980.1`
4	Chromosome	染色体	0.00000	`XP_057799980.1`
5	Centromere	着丝粒	0.00000	`XP_057799980.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr3:64456808`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C49
`Chr3:64456838`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	C60,C61,D11
`Chr3:64456932`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr3:64456982`	`TG`	`T`	1bp_deletion	frameshift_variant	1	A6
`Chr3:64456982`	`TG`	`T`	1bp_deletion	CDS_variant	1	A6
`Chr3:64457135`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr3:64457306`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A6,B26,C77
`Chr3:64457411`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr3:64457420`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A6,B26,C77
`Chr3:64457456`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A6,B26,C77
`Chr3:64457776`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C60,C61
`Chr3:64458024`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B122,B13,B56,B96,C44

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057943997.1
CCAATTGGTAATGCTCAAATGAGACTAGAGAGAGACTCCTCCCCACTTGTGATATAAATTTGGTGTGTGTGAGAGAGAGAGAGAGAGAGAGGAGGATTGAGTTGAAAGCAAGTGCGAGAAGTTTGAGAGGGTTTGACAAGCTGTAATTCACACGTGAAGGCAAAAAAGTCTCCATTTTTCAAAACTAAAATCAGATTACAGTAAGAATTAAGTGGAGATTCTGTTTTCGTTTCTATCTAAGCTCTCAATTTTTTTATCCC...

XM_057943998.1
ATAAATTTGGTGTGTGTGAGAGAGAGAGAGAGAGAGAGGAGGATTGAGTTGAAAGCAAGTGCGAGAAGTTTGAGAGGGTTTGACAAGCTGTAATTCACACGTGAAGGCAAAAAAGTCTCCATTTTTCAAAACTAAAATCAGATTACAGTAAGAATTAAGTGGAGATTCTGTTTTCGTTTCTATCTAAGCTCTCAATTTTTTTATCCCCACTTCTTCATTTTCATTCAATTTTGTTGCTGCACTTCGCCATCAATCTACAG...

CDS

3 records

下载 CDS FASTA

LOC131015571
ATGGGGTGGAGATACAGAGCTGGTTTGCTTTTAATTGCTACCGTTGTCGTTATTTGGGTTGCTTCTGCTGAGGTTACACAGGATATTTTTACAGACTATAAGCAGCCATTTGCTGTGACTTACCTCGGAGCTTCTTTAATGGTGATTTACATACCTATAGCATTCATCAAAGATTGGTTATGTAATATCTTGAAGAAACGTGGTAGTCGAAAGGGTCAAGTTTCGAATGATGACGTTTGTCCCGGTCTAGGCTCTGCACA...

Protein

3 records

下载 Protein FASTA

XP_057799980.1
MGWRYRAGLLLIATVVVIWVASAEVTQDIFTDYKQPFAVTYLGASLMVIYIPIAFIKDWLCNILKKRGSRKGQVSNDDVCPGLGSAQKIFEIEIQGHINRKDSEVDLSEHDEGKPLVPRQVDDSRSIKPEKEITAKEIATYGFYLAPLWFITEYFSNAALARTSVASTTVLSSTSGLFTLFFGAFLGQDTLNIAKIVAVFVSIGGVVMTTLGKTWAADESELNMSSSSKRSLSGDVFGLLSATTYGLFTVLLKKFSGEEG...

XP_057799981.1
MGWRYRAGLLLIATVVVIWVASAEVTQDIFTDYKQPFAVTYLGASLMVIYIPIAFIKDWLCNILKKRGSRKGQVSNDDVCPGLGSAQKIFEIEIQGHINRKDSEVDLSEHDEGKPLVPRQVDDSRSIKPEKEITAKEIATYGFYLAPLWFITEYFSNAALARTSVASTTVLSSTSGLFTLFFGAFLGQDTLNIAKIVAVFVSIGGVVMTTLGKTWAADESELNMSSSKRSLSGDVFGLLSATTYGLFTVLLKKFSGEEGE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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