当前解析结果
SmilChr04G000025| 统一新 Gene ID | SmilChr04G000025 |
|---|---|
| 名称 | SmilChr04G000025 |
| 描述 | uncharacterized SmilChr04G000025 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 264758 - 268886 / - |
| NCBI Gene ID | LOC131022835 |
|---|---|
| GeneID | 131022835 |
| locus_tag | - |
| NCBI Name | LOC131022835 |
| 原始查询 | SmilChr04G000025 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | elongation factor [Source:NCBI gene (formerly Entrezgene);Acc:825136]; symbol=AT3G59670; hit=AT3G59670; species=arabidopsis; confidence=medium |
| 产物 | elongation factor [Source:NCBI gene (formerly Entrezgene);Acc:825136]; symbol=AT3G59670; hit=AT3G59670; species=arabidopsis; confidence=medium |
| Arabidopsis | AT3G59670 (AT3G59670)elongation factor [Source:NCBI gene (formerly Entrezgene);Acc:825136] identity=37.8; qcov=0.567; evalue=1.73e-40; confidence=medium |
| Rice | Os05g0365200 (OSJNBb0111K12.6)- identity=29.2; qcov=0.839; evalue=3.91e-28; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022835 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057808350.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057808350.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057808350.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057808350.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057808350.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:265110 |
C |
CTA |
2bp_insertion | frameshift_variant | 20 | A20,A8,B108,B135,B14,B25,B47,B51,B96,C1,C17,C24,C31,C4,C50,C57,C6,C73,D3,D9 |
Chr4:265173 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B32 |
Chr4:265174 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C6 |
Chr4:265293 |
A |
ACT |
2bp_insertion | frameshift_variant | 1 | C6 |
Chr4:265293 |
A |
ACT |
2bp_insertion | CDS_variant | 1 | C6 |
Chr4:265488 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A14,B112,B134,B36,D9 |
Chr4:265551 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B108 |
Chr4:265572 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C58 |
Chr4:265740 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr4:265741 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B24 |
Chr4:266719 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B128,C66,D5 |
Chr4:266721 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B48,B54 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。