当前解析结果
SmilChr04G000121| 统一新 Gene ID | SmilChr04G000121 |
|---|---|
| 名称 | SmilChr04G000121 |
| 描述 | uncharacterized SmilChr04G000121 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 1038811 - 1041225 / - |
| NCBI Gene ID | LOC131022050 |
|---|---|
| GeneID | 131022050 |
| locus_tag | - |
| NCBI Name | LOC131022050 |
| 原始查询 | SmilChr04G000121 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | maltase-glucoamylase, intestinal protein [Source:NCBI gene (formerly Entrezgene);Acc:833726]; symbol=AT5G37480; hit=AT5G37480; species=arabidopsis; confidence=medium |
| 产物 | maltase-glucoamylase, intestinal protein [Source:NCBI gene (formerly Entrezgene);Acc:833726]; symbol=AT5G37480; hit=AT5G37480; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G37480 (AT5G37480)maltase-glucoamylase, intestinal protein [Source:NCBI gene (formerly Entrezgene);Acc:833726] identity=42.5; qcov=0.909; evalue=1.33e-34; confidence=medium |
| Rice | Os03g0748600 (OSJNBa0069E14.10)- identity=41.7; qcov=0.858; evalue=1.46e-33; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022050 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057807405.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.80000 | XP_057807405.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057807405.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057807405.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057807405.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:1039041 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A20,B50,B52 |
Chr4:1039896 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B121,B50,B52 |
Chr4:1040112 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C61 |
Chr4:1040181 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A20 |
Chr4:1040213 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B8,C70 |
Chr4:1040250 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr4:1040278 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A20,B50,B52 |
Chr4:1040308 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B85,B97,C58 |
Chr4:1040546 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。