当前解析结果
SmilChr04G000167| 统一新 Gene ID | SmilChr04G000167 |
|---|---|
| 名称 | SmilChr04G000167 |
| 描述 | uncharacterized SmilChr04G000167 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 1501725 - 1502267 / - |
| NCBI Gene ID | LOC131021108 |
|---|---|
| GeneID | 131021108 |
| locus_tag | - |
| NCBI Name | LOC131021108 |
| 原始查询 | SmilChr04G000167 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:837478]; symbol=AT1G09520; hit=AT1G09520; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:837478]; symbol=AT1G09520; hit=AT1G09520; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G09520 (AT1G09520)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:837478] identity=36.3; qcov=0.95; evalue=1.87e-23; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131021108 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057806181.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057806181.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057806181.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057806181.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057806181.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:1501744 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr4:1501783 |
ACT |
* |
2bp_deletion | CDS_variant | 2 | B129,C20 |
Chr4:1501811 |
G |
A |
EMS_canonical_SNV | stop_gained | 25 | A13,B102,B124,B126,B33,B38,B39,B59,B67,B73,B75,B9,B91,B94,B97,B98,C12,C14,C21,C46,C53,C64,C66,C82,D6 |
Chr4:1501826 |
C |
CGG |
2bp_insertion | frameshift_variant | 2 | B129,C20 |
Chr4:1501826 |
C |
CGG |
2bp_insertion | CDS_variant | 2 | B129,C20 |
Chr4:1501839 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C1,C14 |
Chr4:1501862 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B102,B115,C20,C42 |
Chr4:1501875 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C62 |
Chr4:1501885 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B124,B3,B87,C39 |
Chr4:1501887 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C37 |
Chr4:1501903 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B25,D8 |
Chr4:1501904 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C37 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。