Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G000169`

染色体: Chr04 坐标: 1506288-1513881 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G000169`
名称	SmilChr04G000169
描述	membrane-bound O-acyltransferase gup1-like
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	1506288 - 1513881 / `-`

ID 对照

NCBI Gene ID	`LOC131022097`
GeneID	`131022097`
locus_tag	`-`
NCBI Name	`LOC131022097`
原始查询	`SmilChr04G000169`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	membrane-bound O-acyltransferase gup1-like
产物	membrane-bound O-acyltransferase gup1-like
Arabidopsis	`AT1G57600` (AT1G57600) MBOAT (membrane bound O-acyl transferase) family protein [Source:NCBI gene (formerly Entrezgene);Acc:842136] identity=70; qcov=0.985; evalue=0; confidence=high
Rice	`Os05g0144000` - identity=66.8; qcov=0.99; evalue=0; confidence=high
GO	GO:0005783 (endoplasmic reticulum); GO:0016746 (acyltransferase activity)
KEGG	smil00563 (Glycosylphosphatidylinositol (GPI)-anchor biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage))
Pfam	PF03062 (MBOAT)
InterPro	-
eggNOG	-
NR	GeneID:131022097

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057807472.1`
2	Endoplasmic reticulum membrane	内质网膜	1.00000	`XP_057807472.1`
3	Nucleus	细胞核	0.00000	`XP_057807472.1`
4	Chromosome	染色体	0.00000	`XP_057807472.1`
5	Centromere	着丝粒	0.00000	`XP_057807472.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:1506436`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B110,C32,C68
`Chr4:1506443`	`T`	`TG`	1bp_insertion	frameshift_variant	19	A19,A2,B106,B121,B135,B17,B3,B31,B4,B6,B78,B88,C29,C34,C35,C52,C57,C65,C67
`Chr4:1506486`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr4:1506512`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A19,B53
`Chr4:1506699`	`C`	`CA`	1bp_insertion	frameshift_variant	160	A1,A10,A11,A14,A18,A19,A21,A22,A24,A25,A4,A6,A7,A8,A9,B10,B101,B102,B104,B105,B108,B11,B110,B111,B112,B114,B115,B118,B119,B12,B120,B121,B122,B126,B127,B128,B13,B130,B132,B138,B139,B140,B15,B16,B19,B2,B21,B22,B23,B26,B27,B28,B29,B3,B30,B31,B34,B35,B37,B38,B39,B42,B43,B48,B5,B50,B52,B53,B54,B56,B57,B58,B60,B61,B62,B63,B64,B68,B69,B7,B70,B71,B72,B74,B75,B77,B78,B80,B81,B83,B87,B89,B90,B92,B93,B96,C1,C12,C13,C16,C17,C18,C19,C2,C20,C22,C24,C25,C26,C27,C28,C29,C3,C30,C31,C33,C34,C35,C36,C37,C38,C39,C40,C41,C43,C44,C45,C47,C5,C50,C51,C52,C54,C55,C58,C59,C6,C60,C61,C62,C63,C7,C70,C72,C74,C75,C79,C8,C81,C82,C83,C86,D10,D11,D2,D3,D4,D6,D8,D9
`Chr4:1506742`	`T`	`TG`	1bp_insertion	frameshift_variant	42	A13,A18,A24,A3,A5,B102,B107,B113,B117,B138,B139,B15,B18,B28,B33,B47,B51,B62,B66,B67,B81,B84,B85,B9,B94,B95,C24,C30,C39,C4,C44,C47,C53,C54,C56,C70,C77,C81,C85,D4,D6,D8
`Chr4:1506748`	`T`	`TA`	1bp_insertion	frameshift_variant	6	A18,B102,B81,B94,C24,C4
`Chr4:1507267`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C7,C82
`Chr4:1508678`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A19,B53
`Chr4:1510046`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A19,B53
`Chr4:1510625`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B100,C72
`Chr4:1510654`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A11,C16,C62

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057807472.1

579 aa

290

579

MBOAT

PF03062 MBOAT 176-467 aa

XP_057807473.1

527 aa

264

527

MBOAT

PF03062 MBOAT 173-467 aa

XP_057807474.1

497 aa

248

497

MBOAT

PF03062 MBOAT 92-385 aa

XP_057807475.1

451 aa

226

451

MBOAT

PF03062 MBOAT 47-339 aa

XP_057807476.1

399 aa

200

399

MBOAT

PF03062 MBOAT 46-339 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057807472.1`	Pfam	`PF03062`	MBOAT	Family	176	467	3.8e-41	142.2	MBOAT, membrane-bound O-acyltransferase family
`XP_057807473.1`	Pfam	`PF03062`	MBOAT	Family	173	467	2.3e-41	142.9	MBOAT, membrane-bound O-acyltransferase family
`XP_057807474.1`	Pfam	`PF03062`	MBOAT	Family	92	385	2.8e-41	142.6	MBOAT, membrane-bound O-acyltransferase family
`XP_057807475.1`	Pfam	`PF03062`	MBOAT	Family	47	339	3.8e-41	142.2	MBOAT, membrane-bound O-acyltransferase family
`XP_057807476.1`	Pfam	`PF03062`	MBOAT	Family	46	339	1.9e-41	143.2	MBOAT, membrane-bound O-acyltransferase family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057951491.1
TTGTGAAATTTCCCGGTTTGAATTGCCGGCAGAACGCGGAAGGGTGAAGATATAAATCCTCTGTGCTCTCAGTCATTCTGCTCGCCGCCGATCTTTACTGAATAACAAAAATTCTGGTTGCATCATTTGATATTGGAGTTACCGAAATTGAAGCTGCGATTGAGCGATTAAGCAGAAAGCAGTGATGAAAAGCAGTTCCTGGAAGCAGAAGGAGCTCATCGTTCTCGTCCTATACGCCGTCGTTTTCTATGCCCTCGTCA...

XM_057951489.1
TTGTGAAATTTCCCGGTTTGAATTGCCGGCAGAACGCGGAAGGGTGAAGATATAAATCCTCTGTGCTCTCAGTCATTCTGCTCGCCGCCGATCTTTACTGAATAACAAAAATTCTGGTTGCATCATTTGATATTGGAGTTACCGAAATTGAAGCTGCGATTGAGCGATTAAGCAGAAAGCAGTGATGAAAAGCAGTTCCTGGAAGCAGAAGGAGCTCATCGTTCTCGTCCTATACGCCGTCGTTTTCTATGCCCTCGTCA...

CDS

5 records

下载 CDS FASTA

LOC131022097
ATGAAAAGCAGTTCCTGGAAGCAGAAGGAGCTCATCGTTCTCGTCCTATACGCCGTCGTTTTCTATGCCCTCGTCATTCGTCGTTCTCTTCAGCTCTCCCATGATCACCACGCAAAGCTATATGGTTTGCGCCCTGGCTGGATCTTCGGCCGCCTTATTGATGCTTCTGACGCACAATGGAGAAATTTCAGGCAGAACTTACCAATTCTCACTGGTGTGTTCGGGATTTTCACATTGGTTGCTAATCTCCTCAAAATATC...

LOC131022097
ATGCCCTCGTCATTCGTCGTTCTCTTCAGCTCTCCCATGATCACCACGCAAAGCTATATGGTTTGCGCCCTGGCTGGATCTTCGGCCGCCTTATTCATCTTATTTATCTTTGGTATTGCTTCAGCTAACTTTTTCCTTGTAAAGATATTTGGAAGGACAAAATACTTCTTATATGGGCTATGGATCTTTAACCTATCATTTCTTGTGTGTAATCGCATTTATGAGGGATATCGGTTCTCTAGTTTTGGAGAACACTGGGC...

Protein

5 records

下载 Protein FASTA

XP_057807472.1
MKSSSWKQKELIVLVLYAVVFYALVIRRSLQLSHDHHAKLYGLRPGWIFGRLIDASDAQWRNFRQNLPILTGVFGIFTLVANLLKISFSLRAKGMSFYWIMISLAYLFYLHGACILFIFGIASANFFLVKIFGRTKYFLYGLWIFNLSFLVCNRIYEGYRFSSFGEHWAYLDDFRGTFRWHICFNFVVLRMISFGHDYHWTDQYSGSDHKKHIQRCDHCSTGKTCYLVLQERRVTNDKFSFPIYLCYLVYAPLYIAGPII...

XP_057807473.1
MKSSSWKQKELIVLVLYAVVFYALVIRRSLQLSHDHHAKLYGLRPGWIFGRLIDASDAQWRNFRQNLPILTGVFGIFTLVANLLKISFSLRAKGMSFYWIMISLAYLFYLHGACILFIFGIASANFFLVKIFGRTKYFLYGLWIFNLSFLVCNRIYEGYRFSSFGEHWAYLDDFRGTFRWHICFNFVVLRMISFGHDYHWTDQYSGSDHKKHIQRCDHCSTGKTCYLVLQERRVTNDKFSFPIYLCYLVYAPLYIAGPII...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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