当前解析结果
SmilChr04G000208| 统一新 Gene ID | SmilChr04G000208 |
|---|---|
| 名称 | SmilChr04G000208 |
| 描述 | uncharacterized SmilChr04G000208 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 1850725 - 1851621 / - |
| NCBI Gene ID | LOC131021114 |
|---|---|
| GeneID | 131021114 |
| locus_tag | - |
| NCBI Name | LOC131021114 |
| 原始查询 | SmilChr04G000208 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819068]; symbol=AT2G44600; hit=AT2G44600; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819068]; symbol=AT2G44600; hit=AT2G44600; species=arabidopsis; confidence=medium |
| Arabidopsis | AT2G44600 (AT2G44600)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:819068] identity=38.6; qcov=1.15; evalue=6.56e-49; confidence=medium |
| Rice | Os02g0689500- identity=34.6; qcov=1.03; evalue=6.71e-29; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131021114 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057806186.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057806186.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057806186.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057806186.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057806186.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:1850758 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A5,B29 |
Chr4:1850971 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr4:1851009 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B21,B22,B7 |
Chr4:1851013 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C20,D2 |
Chr4:1851025 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B7 |
Chr4:1851029 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B128,B82 |
Chr4:1851042 |
GC |
G |
1bp_deletion | frameshift_variant | 2 | B58,C83 |
Chr4:1851042 |
GC |
G |
1bp_deletion | CDS_variant | 2 | B58,C83 |
Chr4:1851054 |
CG |
C |
1bp_deletion | frameshift_variant | 3 | B22,B97,C13 |
Chr4:1851054 |
CG |
C |
1bp_deletion | CDS_variant | 3 | B22,B97,C13 |
Chr4:1851060 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B58,C83 |
Chr4:1851071 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B22,B97,C13 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。