Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G000258`

染色体: Chr04 坐标: 2365289-2371452 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G000258`
名称	SmilChr04G000258
描述	uncharacterized SmilChr04G000258
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	2365289 - 2371452 / `-`

ID 对照

NCBI Gene ID	`LOC131022181`
GeneID	`131022181`
locus_tag	`-`
NCBI Name	`LOC131022181`
原始查询	`SmilChr04G000258`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	Major facilitator superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:819036]; symbol=AT2G44280; hit=AT2G44280; species=arabidopsis; confidence=high
产物	Major facilitator superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:819036]; symbol=AT2G44280; hit=AT2G44280; species=arabidopsis; confidence=high
Arabidopsis	`AT2G44280` (AT2G44280) Major facilitator superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:819036] identity=63.1; qcov=0.997; evalue=0; confidence=high
Rice	`Os07g0578200` - identity=63.1; qcov=0.997; evalue=2.47e-180; confidence=high
GO	GO:0008643 (carbohydrate transport); GO:0015293 (symporter activity); GO:0016020 (membrane)
KEGG	-
Pfam	PF13347 (MFS_2)
InterPro	-
eggNOG	-
NR	GeneID:131022181

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Lysosome	溶酶体	1.00000	`XP_057807595.1`
2	Vesicle	囊泡	1.00000	`XP_057807595.1`
3	Lysosome membrane	溶酶体膜	0.80000	`XP_057807597.1`
4	Endosome	内体	0.60000	`XP_057807597.1`
5	Endosome membrane	内体膜	0.60000	`XP_057807597.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:2365920`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B100
`Chr4:2365937`	`CAG`	`C`	2bp_deletion	frameshift_variant	5	B22,B89,C12,C26,C30
`Chr4:2365937`	`CAG`	`C`	2bp_deletion	CDS_variant	5	B22,B89,C12,C26,C30
`Chr4:2366433`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C58,C78
`Chr4:2366462`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B104,B49,C34,C79,D7
`Chr4:2367152`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B117
`Chr4:2368371`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B19,B61,B81,C22,C75
`Chr4:2368443`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B117
`Chr4:2369186`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B110,B124,B6,B88,C22

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057807595.1

455 aa

228

455

MFS_2

PF13347 MFS_2 23-438 aa

XP_057807596.1

455 aa

228

455

MFS_2

PF13347 MFS_2 23-438 aa

XP_057807597.1

397 aa

198

397

MFS_2

PF13347 MFS_2 5-380 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057807595.1`	Pfam	`PF13347`	MFS_2	Family	23	438	7.5e-15	55.1	MFS/sugar transport protein
`XP_057807596.1`	Pfam	`PF13347`	MFS_2	Family	23	438	7.5e-15	55.1	MFS/sugar transport protein
`XP_057807597.1`	Pfam	`PF13347`	MFS_2	Family	5	380	1.6e-09	37.5	MFS/sugar transport protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057951613.1
TTCAGTTTCTGCGCATATATATATATATATATATATATATATATATGTCCATTCAAAGAAGGAAGCGAAGAACGCAAGCATTACTTGCAGAGTTGCAATGTGTACCTACAAAATTCTCATCTCTTTCCCACCCCTCACTACGCCACCATTTCAATAATCCAATTTACGTATAGGAAAATTCGGTGTGCTGCTCAAATCACACAAAGAGGAACTCACTACCTAAGAAAATCTTGAGACTTCTAAACCAGCATGACTGGGGG...

XM_057951612.1
TTCAGTTTCTGCGCATATATATATATATATATATATATATATATATGTCCATTCAAAGAAGGAAGCGAAGAACGCAAGCATTACTTGCAGAGTTGCAATGTGTACCTACAAAATTCTCATCTCTTTCCCACCCCTCACTACGCCACCATTTCAATAATCCAATTTACGTATAGGAAAATTCGGTGTGCTGCTCAAATCACACAAAGAGCTTGCAGGAACTCACTACCTAAGAAAATCTTGAGACTTCTAAACCAGCATGA...

CDS

3 records

下载 CDS FASTA

LOC131022181
ATGACTGGGGGCTCAACTGATGATGATTCATGCACCAAGCCTATAGGAAGATGCGCCATCTTCTACTATGGGGTGGGACATATGTTGAATGATGTAACATCTGCATGTTGGTTTACATATCTCTTAGTGTTTTTGACCGATATAGGACTGCCCCCAAGTGATGCTGCTGTTGTCATGCTCTCTGGTCAAATTGCTGATGGCTTCATGACAATATTTGCTGGTGAACTGATAGACAGGTATGGGAGTTTTAAGATATGGCA...

Protein

3 records

下载 Protein FASTA

XP_057807595.1
MTGGSTDDDSCTKPIGRCAIFYYGVGHMLNDVTSACWFTYLLVFLTDIGLPPSDAAVVMLSGQIADGFMTIFAGELIDRYGSFKIWHGAGSLLVAVSFSSVFGGCLPCKIIGSYSSGAQTISYSLFAAIFNVGWAATQVSHMSMVNCITLNSTSRVVMTSCRNAFTMVANLSLYVVAFVVFKFHTKRSIIEVEHQYRWIAYASIFIGCCFVSIFHLGTAEPRLKGEAHEIGYARISWTYWFRKLLYHQVALVYVLTRLVT...

XP_057807596.1
MTGGSTDDDSCTKPIGRCAIFYYGVGHMLNDVTSACWFTYLLVFLTDIGLPPSDAAVVMLSGQIADGFMTIFAGELIDRYGSFKIWHGAGSLLVAVSFSSVFGGCLPCKIIGSYSSGAQTISYSLFAAIFNVGWAATQVSHMSMVNCITLNSTSRVVMTSCRNAFTMVANLSLYVVAFVVFKFHTKRSIIEVEHQYRWIAYASIFIGCCFVSIFHLGTAEPRLKGEAHEIGYARISWTYWFRKLLYHQVALVYVLTRLVT...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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