当前解析结果
SmilChr04G000265| 统一新 Gene ID | SmilChr04G000265 |
|---|---|
| 名称 | SmilChr04G000265 |
| 描述 | uncharacterized SmilChr04G000265 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 2416929 - 2417676 / + |
| NCBI Gene ID | LOC131022186 |
|---|---|
| GeneID | 131022186 |
| locus_tag | - |
| NCBI Name | LOC131022186 |
| 原始查询 | SmilChr04G000265 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:832109]; symbol=AT5G19875; hit=AT5G19875; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:832109]; symbol=AT5G19875; hit=AT5G19875; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G19875 (AT5G19875)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:832109] identity=53.9; qcov=0.897; evalue=2.39e-31; confidence=medium |
| Rice | Os09g0445600- identity=56.1; qcov=1.06; evalue=1.28e-25; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022186 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057807602.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.80000 | XP_057807602.1 |
| 3 | Golgi apparatus | 高尔基体 | 0.40000 | XP_057807602.1 |
| 4 | Nucleus membrane | 核膜 | 0.20000 | XP_057807602.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057807602.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:2417113 |
A |
AG |
1bp_insertion | frameshift_variant | 3 | A18,B106,C26 |
Chr4:2417113 |
A |
AG |
1bp_insertion | CDS_variant | 3 | A18,B106,C26 |
Chr4:2417277 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A11,C32,C68 |
Chr4:2417296 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B59,C39,C75 |
Chr4:2417330 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr4:2417345 |
TC |
T |
1bp_deletion | frameshift_variant | 1 | B76 |
Chr4:2417345 |
TC |
T |
1bp_deletion | CDS_variant | 1 | B76 |
Chr4:2417373 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A18,B74,C28,C57,C61 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。