当前解析结果
SmilChr04G000410| 统一新 Gene ID | SmilChr04G000410 |
|---|---|
| 名称 | SmilChr04G000410 |
| 描述 | uncharacterized SmilChr04G000410 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 4285069 - 4286910 / - |
| NCBI Gene ID | LOC131022297 |
|---|---|
| GeneID | 131022297 |
| locus_tag | - |
| NCBI Name | LOC131022297 |
| 原始查询 | SmilChr04G000410 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834239]; symbol=AT5G42330; hit=AT5G42330; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834239]; symbol=AT5G42330; hit=AT5G42330; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G42330 (AT5G42330)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834239] identity=36.9; qcov=0.753; evalue=1.19e-10; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022297 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057807727.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057807728.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057807727.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057807727.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057807727.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:4285373 |
T |
TC |
1bp_insertion | frameshift_variant | 1 | C57 |
Chr4:4285373 |
T |
TC |
1bp_insertion | CDS_variant | 1 | C57 |
Chr4:4285386 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B83,C26,C9 |
Chr4:4285408 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B119,B83,C9 |
Chr4:4285423 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B117,B128,B59,B68,C71 |
Chr4:4285487 |
C |
CAT |
2bp_insertion | frameshift_variant | 1 | C65 |
Chr4:4285487 |
C |
CAT |
2bp_insertion | CDS_variant | 1 | C65 |
Chr4:4285492 |
GC |
G |
1bp_deletion | frameshift_variant | 10 | A20,A7,A8,B19,B56,B7,B96,C30,C75,C76 |
Chr4:4285536 |
G |
GAA |
2bp_insertion | frameshift_variant | 1 | B40 |
Chr4:4285536 |
G |
GAA |
2bp_insertion | CDS_variant | 1 | B40 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。