当前解析结果
SmilChr04G000484| 统一新 Gene ID | SmilChr04G000484 |
|---|---|
| 名称 | SmilChr04G000484 |
| 描述 | O-fucosyltransferase 30 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 5229039 - 5240075 / + |
| NCBI Gene ID | LOC131022365 |
|---|---|
| GeneID | 131022365 |
| locus_tag | - |
| NCBI Name | LOC131022365 |
| 原始查询 | SmilChr04G000484 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | O-fucosyltransferase 30 |
| 产物 | O-fucosyltransferase 30 |
| Arabidopsis | AT4G17430 (AT4G17430)O-fucosyltransferase family protein [Source:NCBI gene (formerly Entrezgene);Acc:827454] identity=60.1; qcov=0.868; evalue=0; confidence=high |
| Rice | Os10g0561200- identity=58.2; qcov=0.881; evalue=9.53e-177; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022365 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Golgi apparatus | 高尔基体 | 1.00000 | XP_057807799.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057807799.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057807799.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057807799.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057807799.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:5229215 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B5,C50 |
Chr4:5229545 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B122 |
Chr4:5230513 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B16,B59,B63,C60 |
Chr4:5230519 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B17,C45 |
Chr4:5230778 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A15,B62,B9,B97 |
Chr4:5230836 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A21 |
Chr4:5230875 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A21,C11 |
Chr4:5230904 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A4,B37,B76,C37,D9 |
Chr4:5231119 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B104,B119,B25,C47,C51 |
Chr4:5231170 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B104,B119,B25,C47,C51 |
Chr4:5231187 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B104,B119,B25,C47,C51 |
Chr4:5231226 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A16 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
5 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。