当前解析结果
SmilChr04G000487| 统一新 Gene ID | SmilChr04G000487 |
|---|---|
| 名称 | SmilChr04G000487 |
| 描述 | uncharacterized SmilChr04G000487 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 5246641 - 5247714 / + |
| NCBI Gene ID | LOC131022891 |
|---|---|
| GeneID | 131022891 |
| locus_tag | - |
| NCBI Name | LOC131022891 |
| 原始查询 | SmilChr04G000487 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DNAse I-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:840968]; symbol=AT1G43760; hit=AT1G43760; species=arabidopsis; confidence=low |
| 产物 | DNAse I-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:840968]; symbol=AT1G43760; hit=AT1G43760; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G43760 (AT1G43760)DNAse I-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:840968] identity=29.5; qcov=0.854; evalue=1.4e-21; confidence=low |
| Rice | Os06g0205337- identity=27.7; qcov=0.967; evalue=6.48e-14; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022891 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057808418.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057808418.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057808418.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057808418.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057808418.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:5246652 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B122 |
Chr4:5246684 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B1,B67 |
Chr4:5246688 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C16 |
Chr4:5246694 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B104,B134,B65,B77 |
Chr4:5246708 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr4:5246710 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B125,B90,B92,C48,C87 |
Chr4:5247118 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B102,B134,B65,B77 |
Chr4:5247122 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B140,B35,B63,B83 |
Chr4:5247144 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr4:5247153 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C16 |
Chr4:5247175 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
Chr4:5247186 |
G |
A |
EMS_canonical_SNV | stop_gained | 3 | B56,B7,B96 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。