当前解析结果
SmilChr04G000575| 统一新 Gene ID | SmilChr04G000575 |
|---|---|
| 名称 | SmilChr04G000575 |
| 描述 | uncharacterized SmilChr04G000575 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 6418301 - 6419386 / + |
| NCBI Gene ID | LOC131022457 |
|---|---|
| GeneID | 131022457 |
| locus_tag | - |
| NCBI Name | LOC131022457 |
| 原始查询 | SmilChr04G000575 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | SUPPRESSOR OF AUXIN RESISTANCE 3 [Source:NCBI gene (formerly Entrezgene);Acc:844407]; symbol=SAR3; hit=AT1G80680; species=arabidopsis; confidence=weak |
| 产物 | SUPPRESSOR OF AUXIN RESISTANCE 3 [Source:NCBI gene (formerly Entrezgene);Acc:844407]; symbol=SAR3; hit=AT1G80680; species=arabidopsis; confidence=weak |
| Arabidopsis | AT1G80680 (SAR3)SUPPRESSOR OF AUXIN RESISTANCE 3 [Source:NCBI gene (formerly Entrezgene);Acc:844407] identity=50; qcov=0.276; evalue=3.9e-09; confidence=weak |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022457 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057807928.1 |
| 2 | Cytoplasm | 细胞质 | 1.00000 | XP_057807928.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057807928.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057807928.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057807928.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:6418433 |
A |
ATT |
2bp_insertion | frameshift_variant | 2 | C66,C81 |
Chr4:6418433 |
A |
ATT |
2bp_insertion | CDS_variant | 2 | C66,C81 |
Chr4:6418496 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr4:6418498 |
AT |
A |
1bp_deletion | frameshift_variant | 1 | B140 |
Chr4:6418498 |
AT |
A |
1bp_deletion | CDS_variant | 1 | B140 |
Chr4:6418519 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A16,B107 |
Chr4:6418523 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C11,C35,C63 |
Chr4:6418525 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B135,B40,C33 |
Chr4:6418532 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr4:6418571 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A16,A3,B107 |
Chr4:6418599 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A10,D10 |
Chr4:6418601 |
G |
GC |
1bp_insertion | frameshift_variant | 1 | A23 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。