当前解析结果
SmilChr04G000650| 统一新 Gene ID | SmilChr04G000650 |
|---|---|
| 名称 | SmilChr04G000650 |
| 描述 | secreted RxLR effector protein 161-like |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 7348215 - 7348793 / - |
| NCBI Gene ID | LOC131022922 |
|---|---|
| GeneID | 131022922 |
| locus_tag | - |
| NCBI Name | LOC131022922 |
| 原始查询 | SmilChr04G000650 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | secreted RxLR effector protein 161-like |
| 产物 | secreted RxLR effector protein 161-like |
| Arabidopsis | AT4G23160 (CRK8)cysteine-rich RECEPTOR-like kinase [Source:NCBI gene (formerly Entrezgene);Acc:828415] identity=40.1; qcov=0.766; evalue=7.35e-33; confidence=medium |
| Rice | Os11g0656500- identity=48.7; qcov=0.974; evalue=6.05e-58; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022922 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057808446.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057808446.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057808446.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057808446.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057808446.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:7348234 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B44,B98,C13 |
Chr4:7348236 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B22,C17 |
Chr4:7348239 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A13,C13 |
Chr4:7348248 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A13,B119,B124,B136,B61 |
Chr4:7348282 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B6,C51,C67 |
Chr4:7348293 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B115,B120,C16,C52,C74 |
Chr4:7348334 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C76 |
Chr4:7348370 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A5 |
Chr4:7348386 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B127,C44 |
Chr4:7348495 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B5,B94,C62 |
Chr4:7348496 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B14,B32,B50,C33 |
Chr4:7348501 |
C |
T |
EMS_canonical_SNV | stop_gained | 3 | A23,B134,B24 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。