当前解析结果
SmilChr04G000651| 统一新 Gene ID | SmilChr04G000651 |
|---|---|
| 名称 | SmilChr04G000651 |
| 描述 | protein FAR1-RELATED SEQUENCE 5-like |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 7360383 - 7361896 / + |
| NCBI Gene ID | LOC131022924 |
|---|---|
| GeneID | 131022924 |
| locus_tag | - |
| NCBI Name | LOC131022924 |
| 原始查询 | SmilChr04G000651 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein FAR1-RELATED SEQUENCE 5-like |
| 产物 | protein FAR1-RELATED SEQUENCE 5-like |
| Arabidopsis | AT4G38180 (FRS5)FAR1-related sequence 5 [Source:NCBI gene (formerly Entrezgene);Acc:829974] identity=33; qcov=0.56; evalue=1.48e-29; confidence=low |
| Rice | Os07g0563600 (OJ1720_F04.111)- identity=34.8; qcov=0.716; evalue=1.43e-45; confidence=low |
| GO | GO:0006355 (regulation of DNA-templated transcription) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131022924 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057808447.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057808447.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057808447.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057808447.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057808447.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:7360442 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B111,B27 |
Chr4:7360443 |
G |
GA |
1bp_insertion | frameshift_variant | 5 | A6,B91,C28,C80,D5 |
Chr4:7360443 |
G |
GA |
1bp_insertion | CDS_variant | 5 | A6,B91,C28,C80,D5 |
Chr4:7360465 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C2,C3 |
Chr4:7360483 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A21,B113,C16 |
Chr4:7360511 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B10,B28,B5,C2,C3 |
Chr4:7360593 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C8 |
Chr4:7360650 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr4:7360663 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B122 |
Chr4:7360680 |
C |
T |
EMS_canonical_SNV | stop_gained | 47 | A10,A16,A18,A22,A7,B10,B101,B106,B108,B109,B11,B114,B127,B135,B138,B139,B24,B32,B4,B40,B44,B56,B57,B67,B68,B70,B73,B75,B83,B84,B85,B99,C12,C21,C24,C3,C33,C34,C36,C46,C49,C52,C6,C60,C61,C62,D4 |
Chr4:7360684 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B7 |
Chr4:7360704 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B10,B28,B5,C2,C3 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。