Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G000799`

染色体: Chr04 坐标: 9879471-9882187 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G000799`
名称	SmilChr04G000799
描述	GDSL esterase/lipase CPRD49-like
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	9879471 - 9882187 / `+`

ID 对照

NCBI Gene ID	`LOC131022645`
GeneID	`131022645`
locus_tag	`-`
NCBI Name	`LOC131022645`
原始查询	`SmilChr04G000799`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	GDSL esterase/lipase CPRD49-like
产物	GDSL esterase/lipase CPRD49-like
Arabidopsis	`AT3G11210` (AT3G11210) SGNH hydrolase-type esterase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:820291] identity=58.4; qcov=0.885; evalue=4.83e-106; confidence=high
Rice	`Os11g0708400` (OsGELP112) - identity=60.7; qcov=0.847; evalue=1.72e-106; confidence=high
GO	GO:0016788 (hydrolase activity, acting on ester bonds)
KEGG	-
Pfam	PF00657 (Lipase_GDSL); PF13472 (Lipase_GDSL_2)
InterPro	-
eggNOG	-
NR	GeneID:131022645

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057808140.1`
2	Cytoplasm	细胞质	0.80000	`XP_057808140.1`
3	Nucleus	细胞核	0.00000	`XP_057808140.1`
4	Chromosome	染色体	0.00000	`XP_057808140.1`
5	Centromere	着丝粒	0.00000	`XP_057808140.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:9879662`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B64
`Chr4:9880294`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B125,B90,B92,C87
`Chr4:9880295`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B108
`Chr4:9880334`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B75
`Chr4:9880339`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr4:9880365`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B41,C39,C75,D10
`Chr4:9880543`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C7
`Chr4:9880568`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B35,C69
`Chr4:9880607`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B75
`Chr4:9880610`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A18,B124,B16,B82
`Chr4:9880634`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr4:9881102`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B35

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057808140.1

302 aa

151

302

Lipase_GDSL

Lipase_GDSL_2

PF00657 Lipase_GDSL 10-210 aa PF13472 Lipase_GDSL_2 11-204 aa

XP_057808141.1

296 aa

148

296

Lipase_GDSL

Lipase_GDSL_2

PF00657 Lipase_GDSL 10-204 aa PF13472 Lipase_GDSL_2 11-198 aa

XP_057808142.1

294 aa

147

294

Lipase_GDSL

Lipase_GDSL_2

PF00657 Lipase_GDSL 10-202 aa PF13472 Lipase_GDSL_2 11-196 aa

XP_057808143.1

288 aa

144

288

Lipase_GDSL

Lipase_GDSL_2

PF00657 Lipase_GDSL 10-196 aa PF13472 Lipase_GDSL_2 11-190 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057808140.1`	Pfam	`PF00657`	Lipase_GDSL	Family	10	210	4.1e-20	73.6	GDSL-like Lipase/Acylhydrolase
`XP_057808140.1`	Pfam	`PF13472`	Lipase_GDSL_2	Domain	11	204	2.3e-23	84.4	GDSL-like Lipase/Acylhydrolase family
`XP_057808141.1`	Pfam	`PF00657`	Lipase_GDSL	Family	10	204	5.8e-20	73.0	GDSL-like Lipase/Acylhydrolase
`XP_057808141.1`	Pfam	`PF13472`	Lipase_GDSL_2	Domain	11	198	5.5e-20	73.4	GDSL-like Lipase/Acylhydrolase family
`XP_057808142.1`	Pfam	`PF00657`	Lipase_GDSL	Family	10	202	8e-22	79.1	GDSL-like Lipase/Acylhydrolase
`XP_057808142.1`	Pfam	`PF13472`	Lipase_GDSL_2	Domain	11	196	2.3e-26	94.1	GDSL-like Lipase/Acylhydrolase family
`XP_057808143.1`	Pfam	`PF00657`	Lipase_GDSL	Family	10	196	1.2e-21	78.6	GDSL-like Lipase/Acylhydrolase
`XP_057808143.1`	Pfam	`PF13472`	Lipase_GDSL_2	Domain	11	190	5.6e-23	83.1	GDSL-like Lipase/Acylhydrolase family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057952159.1
AGTAAAATAAGCTTCCACAGTTCCACTCCTGCAAGCCTGGCCTTCAACTTCATTAAAAAAAAAAATCCTTCAAGTTTTATTTGGCGAAATTGAAGCTGTAGATCAAGTTTGAGATTCACGAAGGAGAAGAAGAGGAAGATGGTGGCTACGCGGCGGCCGCAGTTCGTGCTGTTTGGATCATCCATTGTTCAGATGAGCTTCAATGTTGGAGGCTGGGGTGCTATTTTTGCTGACCTTTACGCCCGAAAGGCGGATGTGTT...

XM_057952160.1
AGTAAAATAAGCTTCCACAGTTCCACTCCTGCAAGCCTGGCCTTCAACTTCATTAAAAAAAAAAATCCTTCAAGTTTTATTTGGCGAAATTGAAGCTGTAGATCAAGTTTGAGATTCACGAAGGAGAAGAAGAGGAAGATGGTGGCTACGCGGCGGCCGCAGTTCGTGCTGTTTGGATCATCCATTGTTCAGATGAGCTTCAATGTTGGAGGCTGGGGTGCTATTTTTGCTGACCTTTACGCCCGAAAGGCGGATGTGTT...

CDS

4 records

下载 CDS FASTA

LOC131022645
ATGGTGGCTACGCGGCGGCCGCAGTTCGTGCTGTTTGGATCATCCATTGTTCAGATGAGCTTCAATGTTGGAGGCTGGGGTGCTATTTTTGCTGACCTTTACGCCCGAAAGGCGGATGTGTTACTACGAGGATACAATGGTTGGAACACGGGAATGGCTCTCCAGGTCTTGGACAAGGTCTTCCCCAAGGACGAACTTGTTCAGCCCTCTTTGGTTATACTTTATTTTGGCGGTAATGATTCAACTAACCCTCACCCAAG...

Protein

4 records

下载 Protein FASTA

XP_057808140.1
MVATRRPQFVLFGSSIVQMSFNVGGWGAIFADLYARKADVLLRGYNGWNTGMALQVLDKVFPKDELVQPSLVILYFGGNDSTNPHPSGLGAHVPLPEYIENMKKVIAHIKSLSNETRIICLTSPPVNEARIREVFGNELDDQERTNEGCRIYSEKLVELCKEMDVEVINLWTAIQERDDWADSCFTLFSGCMCRDGIHLSAEGSETVVREILKVLKRVDWEPSLYWLKMAPDFAYDSPYYVVGPDGKTTVNLSNRIGTWK...

XP_057808141.1
MVATRRPQFVLFGSSIVQMSFNVGGWGAIFADLYARKADVLLRGYNGWNTGMALQVLDKVFPKDELVQPSLVILYFGGNDSTNPHPSGLGAHVPLPEYIENMKKSLSNETRIICLTSPPVNEARIREVFGNELDDQERTNEGCRIYSEKLVELCKEMDVEVINLWTAIQERDDWADSCFTLFSGCMCRDGIHLSAEGSETVVREILKVLKRVDWEPSLYWLKMAPDFAYDSPYYVVGPDGKTTVNLSNRIGTWKTRWLDI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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