Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G001084`

染色体: Chr04 坐标: 15544631-15551614 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G001084`
名称	SmilChr04G001084
描述	uncharacterized SmilChr04G001084
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	15544631 - 15551614 / `-`

ID 对照

NCBI Gene ID	`LOC131019800`
GeneID	`131019800`
locus_tag	`-`
NCBI Name	`LOC131019800`
原始查询	`SmilChr04G001084`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	Mitochondrial ATP synthase D chain-related protein [Source:NCBI gene (formerly Entrezgene);Acc:818440]; symbol=AT2G38580; hit=AT2G38580; species=arabidopsis; confidence=low
产物	Mitochondrial ATP synthase D chain-related protein [Source:NCBI gene (formerly Entrezgene);Acc:818440]; symbol=AT2G38580; hit=AT2G38580; species=arabidopsis; confidence=low
Arabidopsis	`AT2G38580` (AT2G38580) Mitochondrial ATP synthase D chain-related protein [Source:NCBI gene (formerly Entrezgene);Acc:818440] identity=33.4; qcov=0.85; evalue=1.1e-45; confidence=low
Rice	`Os03g0333000` - identity=26.1; qcov=1; evalue=3.29e-11; confidence=low
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131019800

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Golgi apparatus	高尔基体	0.60000	`XP_057804368.1`
2	Endoplasmic reticulum	内质网	0.40000	`XP_057804368.1`
3	Endoplasmic reticulum membrane	内质网膜	0.40000	`XP_057804372.1`
4	Cytoplasm	细胞质	0.20000	`XP_057804368.1`
5	Nucleus	细胞核	0.00000	`XP_057804371.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:15544934`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr4:15544949`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B7
`Chr4:15544951`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B53
`Chr4:15545381`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr4:15548266`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D7
`Chr4:15548271`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C87
`Chr4:15548844`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B53
`Chr4:15549256`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B53,D10
`Chr4:15549733`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D7
`Chr4:15549893`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A21,C79
`Chr4:15549922`	`GAC`	`G`	2bp_deletion	frameshift_variant	36	A13,A15,A23,A8,B101,B104,B106,B108,B113,B117,B138,B2,B20,B27,B49,B58,B62,B66,B75,B79,B80,B82,B89,B9,B99,C10,C13,C43,C60,C72,C73,C79,C80,C81,D10,D5
`Chr4:15549925`	`TA`	`T`	1bp_deletion	frameshift_variant	36	A13,A15,A23,A8,B101,B104,B106,B108,B113,B117,B138,B2,B20,B27,B49,B58,B62,B66,B75,B79,B80,B82,B89,B9,B99,C10,C13,C43,C60,C72,C73,C79,C80,C81,D10,D5

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

6 records

下载 cDNA FASTA

XM_057948390.1
TTTATTTGGTGTCGACAAAGTGAAACGTAAAAGTACCTGCAAAATGAAGGCAAATGCCGTTTGAAGCAAAATCTCGTTACCACTTCCAGCAAAATCTAACTCAGAATTATTCAGAGGCCTCACTTGCAAGCAATAACTGACTCAACTCCAGAATCTAGCCAAAAGTTTTTTCATTTCGTTATCTGACGTATTCACTAATGGAGGATGACAAGAAGAAGAGGAAGAAGAACAAAAAGAAGAAGAATAAGCAAGCCAACGAA...

XM_057948387.1
TTATTTGGTGTCGACAAAGTGAAACGTAAAAGTACCTGCAAAATGAAGGCAAATGCCGTTTGAAGCAAAATCTCGTTACCACTTCCAGCAAAATCTAACTCAGAATTATTCAGAGGCCTCACTTGCAAGCAATAACTGACTCAACTCCAGAATCTAGCCAAAAGTTTTTTCATTTCGTTATCTGACGTATTCACTAATGGAGGATGACAAGAAGAAGAGGAAGAAGAACAAAAAGAAGAAGAATAAGCAAGCCAACGAAC...

CDS

6 records

下载 CDS FASTA

LOC131019800
ATGGAGGATGACAAGAAGAAGAGGAAGAAGAACAAAAAGAAGAAGAATAAGCAAGCCAACGAACCAACTGAAAGTGACAAACTTGATGCTAAGGAATCAACTTCTGATAGTCAGAGCCATGTGCAGGAGATAGGAGAGAATTGTGACATTCAAGTGTCAGAGATTGTAGATGCGTCAAATGATACTATAGGGCACATAACTGCAGATGGCAATGGATGTCTTGTCAATGGCACTGAAGTAACAAACCTGGCTGAAGCGGA...

Protein

6 records

下载 Protein FASTA

XP_057804368.1
MEDDKKKRKKNKKKKNKQANEPTESDKLDAKESTSDSQSHVQEIGENCDIQVSEIVDASNDTIGHITADGNGCLVNGTEVTNLAEAEKQHWLDREATLEGKVNKLQAEKNAQVQKEACLEERIKQLMEEHDGNLEKVASQSEKIKQLEDEKNASLQNEARLKERLAELENEKDSLIQKEGSCEQKIQELQREMNSQLQKEASLQKEILQLKGEKDSWAQTEAGFGPKFNQMVDEASLLNLKVVSLEETVKEMERDGDSWI...

XP_057804369.1
MEDDKKKRKKNKKKKNKQANEPTESDKLDAKESTSDSQSHVQEIGENCDIQVSEIVDASNDTIGHITADGNGCLVNGTEVTNLAEAEKQHWLDREATLEGKVNKLQAEKNAQVQKEACLEERIKQLMEEHDGNLEKVASQSEKIKQLEDEKNASLQNEARLKERLAELENEKDSLIQKEGSCEQKIQELQREMNSQLQKEASLQKEILQLKGEKDSWAQTEAGFGPKFNQMVDEASLLNLKVVSLEETVKEMERDGDSWI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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