当前解析结果
SmilChr04G001091| 统一新 Gene ID | SmilChr04G001091 |
|---|---|
| 名称 | SmilChr04G001091 |
| 描述 | uncharacterized SmilChr04G001091 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 15618743 - 15622884 / + |
| NCBI Gene ID | LOC131019809 |
|---|---|
| GeneID | 131019809 |
| locus_tag | - |
| NCBI Name | LOC131019809 |
| 原始查询 | SmilChr04G001091 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:818439]; symbol=AT2G38570; hit=AT2G38570; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:818439]; symbol=AT2G38570; hit=AT2G38570; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G38570 (AT2G38570)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:818439] identity=57.1; qcov=0.739; evalue=3.33e-65; confidence=high |
| Rice | Os03g0334100- identity=56.6; qcov=0.49; evalue=2.89e-38; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131019809 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057804385.1 |
| 2 | Chloroplast stroma | 叶绿体基质 | 1.00000 | XP_057804388.1 |
| 3 | Cytoplasm | 细胞质 | 0.40000 | XP_057804393.1 |
| 4 | Cytosol | 细胞质基质 | 0.40000 | XP_057804393.1 |
| 5 | Chloroplast thylakoid | 类囊体 | 0.20000 | XP_057804390.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:15619663 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B30,B71,C80 |
Chr4:15619671 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr4:15619721 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B129,C64,C66 |
Chr4:15619732 |
AG |
A |
1bp_deletion | frameshift_variant | 12 | A15,B35,B71,B90,B92,C14,C39,C4,C44,C48,C50,C54 |
Chr4:15619735 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C85 |
Chr4:15619758 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B91,C82,D7 |
Chr4:15619786 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B30,B71,C80 |
Chr4:15619836 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C23,C25 |
Chr4:15619887 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A21,B13 |
Chr4:15619970 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B67 |
Chr4:15619994 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A21,B13 |
Chr4:15619995 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B133,C14,C74 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
14 records
下载 cDNA FASTA14 records
下载 CDS FASTA14 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。