当前解析结果
SmilChr04G001527| 统一新 Gene ID | SmilChr04G001527 |
|---|---|
| 名称 | SmilChr04G001527 |
| 描述 | uncharacterized SmilChr04G001527 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 25196647 - 25197729 / - |
| NCBI Gene ID | LOC131021094 |
|---|---|
| GeneID | 131021094 |
| locus_tag | - |
| NCBI Name | LOC131021094 |
| 原始查询 | SmilChr04G001527 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | maternal effect embryo arrest 60 [Source:NCBI gene (formerly Entrezgene);Acc:830480]; symbol=MEE60; hit=AT5G05950; species=arabidopsis; confidence=high |
| 产物 | maternal effect embryo arrest 60 [Source:NCBI gene (formerly Entrezgene);Acc:830480]; symbol=MEE60; hit=AT5G05950; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G05950 (MEE60)maternal effect embryo arrest 60 [Source:NCBI gene (formerly Entrezgene);Acc:830480] identity=65; qcov=0.994; evalue=2.25e-71; confidence=high |
| Rice | Os07g0240400 (P0523A04.123)- identity=53.7; qcov=1.07; evalue=2.29e-51; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131021094 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Vacuole | 液泡 | 1.00000 | XP_057806167.1 |
| 2 | Vacuole membrane | 液泡膜 | 1.00000 | XP_057806167.1 |
| 3 | Cell membrane | 细胞膜 | 0.80000 | XP_057806167.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057806167.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057806167.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:25197016 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C4 |
Chr4:25197028 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | D10,D11 |
Chr4:25197113 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr4:25197118 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A2,A8 |
Chr4:25197196 |
AG |
A |
1bp_deletion | frameshift_variant | 3 | B125,B90,C87 |
Chr4:25197196 |
AG |
A |
1bp_deletion | CDS_variant | 3 | B125,B90,C87 |
Chr4:25197218 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | A19 |
Chr4:25197218 |
GC |
G |
1bp_deletion | CDS_variant | 1 | A19 |
Chr4:25197220 |
TG |
T |
1bp_deletion | frameshift_variant | 1 | A19 |
Chr4:25197220 |
TG |
T |
1bp_deletion | CDS_variant | 1 | A19 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。