当前解析结果
SmilChr04G001587| 统一新 Gene ID | SmilChr04G001587 |
|---|---|
| 名称 | SmilChr04G001587 |
| 描述 | uncharacterized SmilChr04G001587 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 26379524 - 26382320 / + |
| NCBI Gene ID | LOC131020020 |
|---|---|
| GeneID | 131020020 |
| locus_tag | - |
| NCBI Name | LOC131020020 |
| 原始查询 | SmilChr04G001587 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824767]; symbol=AT3G56010; hit=AT3G56010; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824767]; symbol=AT3G56010; hit=AT3G56010; species=arabidopsis; confidence=medium |
| Arabidopsis | AT3G56010 (AT3G56010)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824767] identity=72.8; qcov=0.511; evalue=7.09e-55; confidence=medium |
| Rice | Os03g0293100- identity=56.1; qcov=0.623; evalue=1.52e-41; confidence=medium |
| GO | GO:0009535 (chloroplast thylakoid membrane) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131020020 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057804633.1 |
| 2 | Chloroplast thylakoid | 类囊体 | 1.00000 | XP_057804633.1 |
| 3 | Chloroplast thylakoid membrane | 类囊体膜 | 1.00000 | XP_057804633.1 |
| 4 | Chloroplast membrane | 叶绿体膜 | 0.20000 | XP_057804633.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057804633.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:26381557 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B41,B53 |
Chr4:26381604 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B66 |
Chr4:26381633 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B66 |
Chr4:26381743 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A13,B104,B25,C13 |
Chr4:26381815 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr4:26381822 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B125,B7,C41 |
Chr4:26381826 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A21,C85 |
Chr4:26381939 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B8,C83 |
Chr4:26381969 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A1,B49,C71 |
Chr4:26381997 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B58,B66 |
Chr4:26382069 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B40,B88 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。