Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G001619`

染色体: Chr04 坐标: 26957025-26960456 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G001619`
名称	SmilChr04G001619
描述	uncharacterized SmilChr04G001619
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	26957025 - 26960456 / `+`

ID 对照

NCBI Gene ID	`LOC131020049`
GeneID	`131020049`
locus_tag	`-`
NCBI Name	`LOC131020049`
原始查询	`SmilChr04G001619`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859]; symbol=MUG7; hit=AT3G05850; species=arabidopsis; confidence=weak
产物	MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859]; symbol=MUG7; hit=AT3G05850; species=arabidopsis; confidence=weak
Arabidopsis	`AT3G05850` (MUG7) MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859] identity=24.1; qcov=0.955; evalue=7.17e-59; confidence=weak
Rice	`Os12g0597300` - identity=26.6; qcov=0.666; evalue=6.91e-55; confidence=low
GO	GO:0008270 (zinc ion binding)
KEGG	-
Pfam	PF00872 (Transposase_mut); PF04434 (SWIM); PF10551 (MULE)
InterPro	-
eggNOG	-
NR	GeneID:131020049

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057804666.1`
2	Cytoplasm	细胞质	0.20000	`XP_057804666.1`
3	Chromosome	染色体	0.00000	`XP_057804667.1`
4	Centromere	着丝粒	0.00000	`XP_057804667.1`
5	Chromatin	染色质	0.00000	`XP_057804667.1`

进入亚细胞定位查询

EMS 诱变突变

该基因暂未检索到已上线的精选 EMS CDS / LoF 突变，或 EMS 突变库仍在构建。

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057804666.1

887 aa

444

887

Transposase_mut

MULE

SWIM

PF00872 Transposase_mut 463-563 aa PF10551 MULE 464-558 aa PF04434 SWIM 707-737 aa

XP_057804667.1

851 aa

426

851

Transposase_mut

MULE

SWIM

PF00872 Transposase_mut 427-527 aa PF10551 MULE 428-522 aa PF04434 SWIM 671-701 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057804666.1`	Pfam	`PF00872`	Transposase_mut	Family	463	563	1.7e-10	41.1	Transposase, Mutator family
`XP_057804666.1`	Pfam	`PF10551`	MULE	Domain	464	558	3.7e-20	72.8	MULE transposase domain
`XP_057804666.1`	Pfam	`PF04434`	SWIM	Domain	707	737	3.8e-07	30.2	SWIM zinc finger
`XP_057804667.1`	Pfam	`PF00872`	Transposase_mut	Family	427	527	1.5e-10	41.2	Transposase, Mutator family
`XP_057804667.1`	Pfam	`PF10551`	MULE	Domain	428	522	6.4e-20	72.1	MULE transposase domain
`XP_057804667.1`	Pfam	`PF04434`	SWIM	Domain	671	701	3.6e-07	30.3	SWIM zinc finger

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057948684.1
ATCTGATTCTCTCTCTCTATTCACGTTTATGGCGTGATTTTATGTGATATTATGGTTGTTGGGTGCATTTACACCAACTCAAACACTTGTTAAGGAAACAACCTTAAATTCACGAAATTAAATGCTCCGTACACGGCTGCTGTGGGTAGTTAATGAAGGATACCAACCAAATGTTCATTCATCAGACATTTGAACAAGAAAGAAGAAGAAAATCCTCTCAATACACATACACGACTCATACACGGTTGCTCAAAAATTCA...

XM_057948683.1
TCAATAATTATGTTATATATATGACTTATTACATGTTTTGGACTAAAAAACGACATAAAAAAACACTCTGTACGCAAATTACCTTATTTTTGAACCCTTAGTGTTCTGCTGTACACGGTTAGGGTTTCTGTGTACACGGTTGTGTACACGGTTGTACACGGTGGTCGAATTTGCTGTACACGGTTGGGTTGAATATGATTTTGAGGTTATTTTTAGCATGTTTGTATATTCAGTTGATGTATTGGGGTACACGGTTTCCT...

CDS

2 records

下载 CDS FASTA

LOC131020049
ATGATTTTGAGGTTATTTTTAGCATGTTTGTATATTCAGTTGATGTATTGGGGTACACGGTTTCCTGTTTGTGTATTTAAATGTTGTATTTTTGTCGTTTTGAAGCAGATGTCGTTTCAAGCAATCGTTATACGGCACAGTGGTCAGTGGAAATTAACCGAGTATGAAGGAGGCGATGAGGTTGTCGTGTACATGTCTAAGGAAGACCTTTGTCATGCGAAATTGATGCAAGAGGTGCACGATCAATTAAACGAGGATGG...

LOC131020049
ATGTCGTTTCAAGCAATCGTTATACGGCACAGTGGTCAGTGGAAATTAACCGAGTATGAAGGAGGCGATGAGGTTGTCGTGTACATGTCTAAGGAAGACCTTTGTCATGCGAAATTGATGCAAGAGGTGCACGATCAATTAAACGAGGATGGTCGATCCACTTATATGCTTTTCTACACATCGACCACGGACGAAGGGCGAAGAATAAAAGTGGCTTTGAAGACTGATTCGGATTTGAACCGACTGATTTCCGAGCATAA...

Protein

2 records

下载 Protein FASTA

XP_057804666.1
MILRLFLACLYIQLMYWGTRFPVCVFKCCIFVVLKQMSFQAIVIRHSGQWKLTEYEGGDEVVVYMSKEDLCHAKLMQEVHDQLNEDGRSTYMLFYTSTTDEGRRIKVALKTDSDLNRLISEHKKYPVVYVIEKGKQSAAPIPHTQERVYYEGHRSTVFPIETDVGRSIPTHDDSRDDSSSQEEEDESESSDEEEEAIRRREILDSVSTEQEAWRQTGPQNFTSDDQPDVEPRVGVQQLEARDWGIPVLDFDDAPALGWED...

XP_057804667.1
MSFQAIVIRHSGQWKLTEYEGGDEVVVYMSKEDLCHAKLMQEVHDQLNEDGRSTYMLFYTSTTDEGRRIKVALKTDSDLNRLISEHKKYPVVYVIEKGKQSAAPIPHTQERVYYEGHRSTVFPIETDVGRSIPTHDDSRDDSSSQEEEDESESSDEEEEAIRRREILDSVSTEQEAWRQTGPQNFTSDDQPDVEPRVGVQQLEARDWGIPVLDFDDAPALGWEDSNVLESGILSVGALFRSKDDLAIAVGLYHMENHVEY...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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