Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G001624`

染色体: Chr04 坐标: 27004904-27011019 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G001624`
名称	SmilChr04G001624
描述	potassium transporter 2
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	27004904 - 27011019 / `+`

ID 对照

NCBI Gene ID	`LOC131020050`
GeneID	`131020050`
locus_tag	`-`
NCBI Name	`LOC131020050`
原始查询	`SmilChr04G001624`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	potassium transporter 2
产物	potassium transporter 2
Arabidopsis	`AT2G40540` (KT2) potassium transporter 2 [Source:NCBI gene (formerly Entrezgene);Acc:818649] identity=78.1; qcov=1.02; evalue=0; confidence=high
Rice	`Os03g0337500` (OsHAK8) - identity=72.9; qcov=1.01; evalue=0; confidence=high
GO	GO:0005886 (plasma membrane); GO:0015079 (potassium ion transmembrane transporter activity); GO:0071805 (potassium ion transmembrane transport)
KEGG	-
Pfam	PF02705 (K_trans); PF22776 (K_trans_C)
InterPro	-
eggNOG	-
NR	GeneID:131020050

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	0.80000	`XP_057804668.1`
2	Vacuole	液泡	0.80000	`XP_057804668.1`
3	Vacuole membrane	液泡膜	0.80000	`XP_057804668.1`
4	Nucleus	细胞核	0.00000	`XP_057804668.1`
5	Chromosome	染色体	0.00000	`XP_057804668.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:27006221`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B117
`Chr4:27006227`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B8,C83
`Chr4:27006798`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B134,B65,B77,C14,C4
`Chr4:27006825`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B117,B31
`Chr4:27006851`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B22,B44,C50
`Chr4:27006866`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A2,A8
`Chr4:27007093`	`TA`	`T`	1bp_deletion	frameshift_variant	1	C67
`Chr4:27007093`	`TA`	`T`	1bp_deletion	CDS_variant	1	C67
`Chr4:27008268`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B51,C46
`Chr4:27008283`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B8,C83
`Chr4:27009608`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B98,C80
`Chr4:27009934`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B64

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057804668.1

791 aa

396

791

K_trans

K_trans_C

PF02705 K_trans 22-496 aa PF22776 K_trans_C 527-789 aa

XP_057804670.1

791 aa

396

791

K_trans

K_trans_C

PF02705 K_trans 22-496 aa PF22776 K_trans_C 527-789 aa

XP_057804671.1

791 aa

396

791

K_trans

K_trans_C

PF02705 K_trans 22-496 aa PF22776 K_trans_C 527-789 aa

XP_057804672.1

791 aa

396

791

K_trans

K_trans_C

PF02705 K_trans 22-496 aa PF22776 K_trans_C 527-789 aa

XP_057804673.1

791 aa

396

791

K_trans

K_trans_C

PF02705 K_trans 22-496 aa PF22776 K_trans_C 527-789 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057804668.1`	Pfam	`PF02705`	K_trans	Domain	22	496	7e-165	549.6	K+ potassium transporter integral membrane domain
`XP_057804668.1`	Pfam	`PF22776`	K_trans_C	Domain	527	789	5.6e-30	104.9	K+ potassium transporter C-terminal domain
`XP_057804670.1`	Pfam	`PF02705`	K_trans	Domain	22	496	7e-165	549.6	K+ potassium transporter integral membrane domain
`XP_057804670.1`	Pfam	`PF22776`	K_trans_C	Domain	527	789	5.6e-30	104.9	K+ potassium transporter C-terminal domain
`XP_057804671.1`	Pfam	`PF02705`	K_trans	Domain	22	496	7e-165	549.6	K+ potassium transporter integral membrane domain
`XP_057804671.1`	Pfam	`PF22776`	K_trans_C	Domain	527	789	5.6e-30	104.9	K+ potassium transporter C-terminal domain
`XP_057804672.1`	Pfam	`PF02705`	K_trans	Domain	22	496	7e-165	549.6	K+ potassium transporter integral membrane domain
`XP_057804672.1`	Pfam	`PF22776`	K_trans_C	Domain	527	789	5.6e-30	104.9	K+ potassium transporter C-terminal domain
`XP_057804673.1`	Pfam	`PF02705`	K_trans	Domain	22	496	7e-165	549.6	K+ potassium transporter integral membrane domain
`XP_057804673.1`	Pfam	`PF22776`	K_trans_C	Domain	527	789	5.6e-30	104.9	K+ potassium transporter C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057948688.1
AGCATAAAGAGAGAAGAAAAAAGATGTGCTTTTGATGCCAAAGACTGTTTTCAGTAGTAATGAAAAAACATAGAGAGGGGTCCATGTTCTTATCACGTGCCGCTGCTGCCCATAAACAAATACTCCATTAGTACTATACTATATACTCCTTTTTTTCTTCCGATTTTATCCGATTTGGTTCCAACTTTTGTGCCCCTTCTCGAACTTGCCAAGGAAAAGCAATAGTTTCATTGAAAATCAATGGATCTTAGCTGTGGGAA...

XM_057948685.1
GAGGGGTCCATGTTCTTATCACGTGCCGCTGCTGCCCATAAACAAATACTCCATTAGTACTATACTATATACTCCTTTTTTTCTTCCGATTTTATCCGATTTGGTTCCAACTTTTGTGCCCCTTCTCGAACTTGCCAAGGAAAAGGTAAACTTCAACTTGAAAAAAGAGGCAATAGCGGTACCATTTCAAAGTTTCTTGTAATCCTTTTCCAACTTCTGGGCTCTTGCTTTGAATCATATTCAGTTTTTTAGCAGTTGAA...

CDS

5 records

下载 CDS FASTA

LOC131020050
ATGGATCTTAGCTGTGGGAATTGTTGGAGAAATCCAAAGAAGGATTCTTGGAAGGCCACTCTGCTACTAGCTTACCAGAGTCTCGGTGTAGTGTACGGGGACCTTAGCATTTCTCCCCTCTACGTATACAAGAGCACATTTGCGGAAGACATTCATCACTCGGAAACGAATGAGGAGATATTTGGGGTTCTTTCTTTCGTCTTCTGGACATTAACCCTCGTCCCGTTGTTCAAATATGTTTTCATAGTGCTTCGAGCTGA...

Protein

5 records

下载 Protein FASTA

XP_057804668.1
MDLSCGNCWRNPKKDSWKATLLLAYQSLGVVYGDLSISPLYVYKSTFAEDIHHSETNEEIFGVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYSLICRHAKVSLLPNQQVADEALSTYKLEPPPTTKNSSRVKTVLENHKSLHVALLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMSKDHHQYAMVPITCFILVCLFALQHYGTHRIGFFFAPIVLTWLLCISALGLYNIFHWNRHVYQALSPSYMIKFLK...

XP_057804670.1
MDLSCGNCWRNPKKDSWKATLLLAYQSLGVVYGDLSISPLYVYKSTFAEDIHHSETNEEIFGVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYSLICRHAKVSLLPNQQVADEALSTYKLEPPPTTKNSSRVKTVLENHKSLHVALLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMSKDHHQYAMVPITCFILVCLFALQHYGTHRIGFFFAPIVLTWLLCISALGLYNIFHWNRHVYQALSPSYMIKFLK...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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