当前解析结果
SmilChr04G001822| 统一新 Gene ID | SmilChr04G001822 |
|---|---|
| 名称 | SmilChr04G001822 |
| 描述 | uncharacterized SmilChr04G001822 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 29727649 - 29728251 / - |
| NCBI Gene ID | LOC131023261 |
|---|---|
| GeneID | 131023261 |
| locus_tag | - |
| NCBI Name | LOC131023261 |
| 原始查询 | SmilChr04G001822 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os01g0595300; species=rice; confidence=low |
| 产物 | hit=Os01g0595300; species=rice; confidence=low |
| Arabidopsis | AT3G05850 (MUG7)MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859] identity=25.8; qcov=0.95; evalue=7.27e-19; confidence=low |
| Rice | Os01g0595300- identity=33.7; qcov=0.98; evalue=6.6e-25; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023261 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057808788.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057808788.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057808788.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057808788.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057808788.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:29727798 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A25 |
Chr4:29727816 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B48 |
Chr4:29727900 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr4:29727917 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A1,B109,B137,C55 |
Chr4:29727933 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr4:29727936 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr4:29727938 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A14,A5 |
Chr4:29727960 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B34,B40,C28 |
Chr4:29727962 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr4:29727999 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B47 |
Chr4:29728014 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C53 |
Chr4:29728017 |
C |
CT |
1bp_insertion | frameshift_variant | 2 | B87,C15 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。