当前解析结果
SmilChr04G001933| 统一新 Gene ID | SmilChr04G001933 |
|---|---|
| 名称 | SmilChr04G001933 |
| 描述 | uncharacterized SmilChr04G001933 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 31423419 - 31424480 / - |
| NCBI Gene ID | LOC131019920 |
|---|---|
| GeneID | 131019920 |
| locus_tag | - |
| NCBI Name | LOC131019920 |
| 原始查询 | SmilChr04G001933 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Nucleic acid-binding, OB-fold-like protein [Source:NCBI gene (formerly Entrezgene);Acc:819430]; symbol=AT2G05642; hit=AT2G05642; species=arabidopsis; confidence=low |
| 产物 | Nucleic acid-binding, OB-fold-like protein [Source:NCBI gene (formerly Entrezgene);Acc:819430]; symbol=AT2G05642; hit=AT2G05642; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G05642 (AT2G05642)Nucleic acid-binding, OB-fold-like protein [Source:NCBI gene (formerly Entrezgene);Acc:819430] identity=26.9; qcov=0.63; evalue=8.88e-06; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131019920 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057804528.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057804528.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057804528.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057804528.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057804528.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:31423687 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B43,C5 |
Chr4:31423801 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B28,B82 |
Chr4:31423899 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B137,B34,B90,B92,C70 |
Chr4:31423916 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr4:31423934 |
T |
TC |
1bp_insertion | frameshift_variant | 15 | A4,B118,B135,B140,B43,B59,B67,B97,B98,C37,C5,C58,C77,C82,D10 |
Chr4:31423937 |
TC |
T |
1bp_deletion | frameshift_variant | 15 | A4,B118,B135,B140,B43,B59,B67,B97,B98,C37,C5,C58,C77,C82,D10 |
Chr4:31424218 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B88 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。