当前解析结果
SmilChr04G001942| 统一新 Gene ID | SmilChr04G001942 |
|---|---|
| 名称 | SmilChr04G001942 |
| 描述 | uncharacterized SmilChr04G001942 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 31531382 - 31534741 / - |
| NCBI Gene ID | LOC131019902 |
|---|---|
| GeneID | 131019902 |
| locus_tag | - |
| NCBI Name | LOC131019902 |
| 原始查询 | SmilChr04G001942 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834808]; symbol=ASG7; hit=AT5G47580; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834808]; symbol=ASG7; hit=AT5G47580; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G47580 (ASG7)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834808] identity=41.4; qcov=0.971; evalue=5.28e-173; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131019902 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 0.60000 | XP_057804505.1 |
| 2 | Nucleus membrane | 核膜 | 0.40000 | XP_057804505.1 |
| 3 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057804505.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057804505.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057804505.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:31532515 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B95,C81 |
Chr4:31532613 |
TTG |
T |
2bp_deletion | frameshift_variant | 7 | B34,B51,C4,C46,C7,C76,D1 |
Chr4:31532633 |
GA |
G |
1bp_deletion | frameshift_variant | 1 | C73 |
Chr4:31532633 |
GA |
G |
1bp_deletion | CDS_variant | 1 | C73 |
Chr4:31532640 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B31 |
Chr4:31532659 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B82 |
Chr4:31532751 |
TGA |
T |
2bp_deletion | frameshift_variant | 1 | C53 |
Chr4:31532751 |
TGA |
T |
2bp_deletion | CDS_variant | 1 | C53 |
Chr4:31532766 |
A |
AT |
1bp_insertion | frameshift_variant | 1 | C73 |
Chr4:31532766 |
A |
AT |
1bp_insertion | CDS_variant | 1 | C73 |
Chr4:31532846 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A7,B30,C56 |
Chr4:31532908 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B95,C81 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。