当前解析结果
SmilChr04G001947| 统一新 Gene ID | SmilChr04G001947 |
|---|---|
| 名称 | SmilChr04G001947 |
| 描述 | uncharacterized SmilChr04G001947 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 31598935 - 31606680 / - |
| NCBI Gene ID | LOC131023296 |
|---|---|
| GeneID | 131023296 |
| locus_tag | - |
| NCBI Name | LOC131023296 |
| 原始查询 | SmilChr04G001947 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827439]; symbol=AT4G17250; hit=AT4G17250; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827439]; symbol=AT4G17250; hit=AT4G17250; species=arabidopsis; confidence=low |
| Arabidopsis | AT4G17250 (AT4G17250)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827439] identity=35; qcov=0.85; evalue=6.36e-47; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023296 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057808826.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057808826.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057808826.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057808826.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057808826.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:31605863 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B140,C33 |
Chr4:31605951 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B100 |
Chr4:31606031 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B26,B35 |
Chr4:31606033 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B92,C87 |
Chr4:31606034 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B118,B65 |
Chr4:31606035 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C50 |
Chr4:31606036 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B100,B84 |
Chr4:31606045 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B76 |
Chr4:31606046 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A7,B30,B44,C56 |
Chr4:31606052 |
C |
T |
EMS_canonical_SNV | stop_gained | 41 | A3,A5,A9,B106,B108,B109,B12,B130,B133,B137,B16,B18,B24,B29,B32,B4,B47,B55,B60,B70,B74,B77,B88,B98,C2,C25,C28,C34,C5,C52,C60,C63,C64,C65,C66,C70,C72,C73,C82,C83,D8 |
Chr4:31606063 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B63,C53 |
Chr4:31606075 |
G |
GT |
1bp_insertion | stop_gained,frameshift_variant | 3 | A7,B30,C56 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。