当前解析结果
SmilChr04G001960| 统一新 Gene ID | SmilChr04G001960 |
|---|---|
| 名称 | SmilChr04G001960 |
| 描述 | uncharacterized SmilChr04G001960 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 31798910 - 31802906 / - |
| NCBI Gene ID | LOC131019935 |
|---|---|
| GeneID | 131019935 |
| locus_tag | - |
| NCBI Name | LOC131019935 |
| 原始查询 | SmilChr04G001960 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | UDP-N-acetylglucosamine-N-acetylmuramyl-pyrophosphoryl-undecaprenol N-acetylglucosamine protein [Source:NCBI gene (formerly Entrezgene);Acc:836416]; symbol=AT5G62960; hit=AT5G62960; species=arabidopsis; confidence=high |
| 产物 | UDP-N-acetylglucosamine-N-acetylmuramyl-pyrophosphoryl-undecaprenol N-acetylglucosamine protein [Source:NCBI gene (formerly Entrezgene);Acc:836416]; symbol=AT5G62960; hit=AT5G62960; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G62960 (AT5G62960)UDP-N-acetylglucosamine-N-acetylmuramyl-pyrophosphoryl-undecaprenol N-acetylglucosamine protein [Source:NCBI gene (formerly Entrezgene);Acc:836416] identity=58.8; qcov=0.991; evalue=6.23e-138; confidence=high |
| Rice | Os02g0130600- identity=52.8; qcov=1.04; evalue=1.75e-128; confidence=high |
| GO | GO:0016020 (membrane) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131019935 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057804543.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057804543.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057804543.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057804543.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057804543.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:31800398 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B37 |
Chr4:31800847 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B123 |
Chr4:31800847 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B123 |
Chr4:31801790 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C50 |
Chr4:31801843 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A5,B104,B29,B44 |
Chr4:31802102 |
C |
T |
EMS_canonical_SNV | stop_gained | 12 | A4,A9,B78,C17,C19,C30,C31,C35,C45,C46,C53,C74 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。