Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G001986`

染色体: Chr04 坐标: 32154517-32156899 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G001986`
名称	SmilChr04G001986
描述	uncharacterized membrane protein At1g75140-like
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	32154517 - 32156899 / `-`

ID 对照

NCBI Gene ID	`LOC131019955`
GeneID	`131019955`
locus_tag	`-`
NCBI Name	`LOC131019955`
原始查询	`SmilChr04G001986`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog
描述	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:843851]; symbol=AT1G75140; hit=AT1G75140; species=arabidopsis; confidence=high
产物	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:843851]; symbol=AT1G75140; hit=AT1G75140; species=arabidopsis; confidence=high
Arabidopsis	`AT1G75140` (AT1G75140) uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:843851] identity=52.5; qcov=0.952; evalue=0; confidence=high
Rice	`Os06g0115200` - identity=40.5; qcov=1.01; evalue=1.04e-135; confidence=medium
GO	GO:0005515 (protein binding)
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131019955

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Golgi apparatus	高尔基体	0.80000	`XP_057804563.1`
2	Nucleus membrane	核膜	0.60000	`XP_057804564.1`
3	Endoplasmic reticulum	内质网	0.60000	`XP_057804564.1`
4	Endoplasmic reticulum membrane	内质网膜	0.60000	`XP_057804564.1`
5	Nucleus	细胞核	0.40000	`XP_057804563.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:32154726`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B63,C59,C84
`Chr4:32155144`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C57
`Chr4:32155384`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B51,C4,C46,C50
`Chr4:32155856`	`C`	`CA`	1bp_insertion	frameshift_variant	8	A20,B106,B49,B84,C1,C20,C31,C6
`Chr4:32155938`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	C16,C62,D3
`Chr4:32156008`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A7,B30,B98,C56,C80
`Chr4:32156044`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C57
`Chr4:32156084`	`TC`	`T`	1bp_deletion	frameshift_variant	1	B90
`Chr4:32156084`	`TC`	`T`	1bp_deletion	CDS_variant	1	B90
`Chr4:32156542`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr4:32156594`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B110
`Chr4:32156656`	`GA`	`G`	1bp_deletion	frameshift_variant	1	B11

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057948580.1
TCGATTTTACCCCTTGTTCGAACAACATTTTTCAGGAAACTCCCCGAAAACCCGTTTTGAAATTTACTAAAATCGCCCTCGTCTCGCTCCTCAGATCTCACCTTCAAAGCTCAAACTCCCAAGCTAACAGTAACAGCCACAGCCCATCACAGACGCCTTGCTCCACCGCTCCCAGATTTCAATTTGGATGGCTGTTCCTCGCAGAAAAGGCAAGTTAGTCTTCGCGTTAACTGTTTCTTTGCTCCTAGCAGCAGATTTAT...

XM_057948581.1
TGAAATTTACTAAAATCGCCCTCGTCTCGCTCCTCAGATCTCACCTTCAAAGCTCAAACTCCCAAGCTAACAGTAACAGCCACAGCCCATCACAGACGCCTTGCTCCACCGCTCCCAGATTTCAATTTGGATGGCTGTTCCTCGCAGAAAAGGTTAGAATCCCGCTTTTCTGATGATCCGGGAAGTAAAAGGATGCCGTCTTTATCTTCATATGATGATGATGAAAAGAGCGATTCTGAGAAAATTAAGGATTCTGGTAA...

CDS

2 records

下载 CDS FASTA

LOC131019955
ATGGCTGTTCCTCGCAGAAAAGGCAAGTTAGTCTTCGCGTTAACTGTTTCTTTGCTCCTAGCAGCAGATTTATTTTGTTTTCCTCGTCTTTGTTGCGTTGTTCTTGCATCATCAGAATCCGACCCCTCTGTAAATTCTAACTCAGTAATCGAAACAGACTACAAAAATGACATCCAATTTAAGCAAAATGACATCCCTTTTACGGAAACTTGCGTTGATTACGATTTGGTAAGGAAACAGCAGCTCCAATTGGAGAAATT...

LOC131019955
ATGCCGTCTTTATCTTCATATGATGATGATGAAAAGAGCGATTCTGAGAAAATTAAGGATTCTGGTAAAGGAGAGATGAGAGGAGGAGGTGGGATGAAGTCGGGGCCGTTGTTAGTGACTAAGTATAACACGTTTTGGGCGGAGAGGTTTCAGTTTGTATCTGCAGTTAAGTTGAGGTCGAGCCCATCTTGTGTTAATGTGTTGCCTAATAAGGATTTTGAGGGTTTGAGCAAGTATTTTGCTGTTGGGGATGATAAGGG...

Protein

2 records

下载 Protein FASTA

XP_057804563.1
MAVPRRKGKLVFALTVSLLLAADLFCFPRLCCVVLASSESDPSVNSNSVIETDYKNDIQFKQNDIPFTETCVDYDLVRKQQLQLEKFQELVKNLTQLVDRLESRFSDDPGSKRMPSLSSYDDDEKSDSEKIKDSGKGEMRGGGGMKSGPLLVTKYNTFWAERFQFVSAVKLRSSPSCVNVLPNKDFEGLSKYFAVGDDKGKLYLFLRSGEVALEFDAFSEADKPSPISAIVSYLSVYKNETMIVTGHVNGAIVMHRVWET...

XP_057804564.1
MPSLSSYDDDEKSDSEKIKDSGKGEMRGGGGMKSGPLLVTKYNTFWAERFQFVSAVKLRSSPSCVNVLPNKDFEGLSKYFAVGDDKGKLYLFLRSGEVALEFDAFSEADKPSPISAIVSYLSVYKNETMIVTGHVNGAIVMHRVWETFSGDEWSSLHVERVGRFEMPESWGLRISMMEVHHVGRRRYILATDEGGKIMVFKEDGMLYGTATPSKKPIAFLKQRLLFLMETGAGSLDLRTMKLKETECEGLNSSLAKSYVF...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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