当前解析结果
SmilChr04G002580| 统一新 Gene ID | SmilChr04G002580 |
|---|---|
| 名称 | SmilChr04G002580 |
| 描述 | TSL-kinase interacting protein 1 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 41167175 - 41171422 / - |
| NCBI Gene ID | LOC131021694 |
|---|---|
| GeneID | 131021694 |
| locus_tag | - |
| NCBI Name | LOC131021694 |
| 原始查询 | SmilChr04G002580 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | TSL-kinase interacting protein 1 |
| 产物 | TSL-kinase interacting protein 1 |
| Arabidopsis | AT4G39380 (AT4G39380)TSL-kinase interacting-like protein [Source:NCBI gene (formerly Entrezgene);Acc:830093] identity=31.3; qcov=0.968; evalue=2.75e-43; confidence=low |
| Rice | Os03g0241100- identity=59.6; qcov=0.205; evalue=7.61e-34; confidence=weak |
| GO | GO:0003682 (chromatin binding); GO:0005634 (nucleus); GO:0007389 (pattern specification process) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131021694 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057806948.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057806948.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057806948.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057806948.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057806948.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:41167797 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A21,B56,B96,C35 |
Chr4:41168235 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B54 |
Chr4:41168249 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B54 |
Chr4:41168464 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B102,B76 |
Chr4:41168894 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B1,B88,C85 |
Chr4:41169613 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B124,B135,C37 |
Chr4:41169711 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B40,B98,C80 |
Chr4:41169723 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B1,B46,B79,B88,C85 |
Chr4:41170128 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A18,B1,B46,B88,C85 |
Chr4:41170580 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A18 |
Chr4:41170677 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,C20 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
9 records
下载 cDNA FASTA9 records
下载 CDS FASTA9 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。