Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G002629`

染色体: Chr04 坐标: 41695722-41697389 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G002629`
名称	SmilChr04G002629
描述	uncharacterized SmilChr04G002629
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	41695722 - 41697389 / `-`

ID 对照

NCBI Gene ID	`LOC131021742`
GeneID	`131021742`
locus_tag	`-`
NCBI Name	`LOC131021742`
原始查询	`SmilChr04G002629`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	defective in cullin neddylation protein (DUF298) [Source:NCBI gene (formerly Entrezgene);Acc:838156]; symbol=AT1G15860; hit=AT1G15860; species=arabidopsis; confidence=high
产物	defective in cullin neddylation protein (DUF298) [Source:NCBI gene (formerly Entrezgene);Acc:838156]; symbol=AT1G15860; hit=AT1G15860; species=arabidopsis; confidence=high
Arabidopsis	`AT1G15860` (AT1G15860) defective in cullin neddylation protein (DUF298) [Source:NCBI gene (formerly Entrezgene);Acc:838156] identity=59.8; qcov=0.979; evalue=3.43e-100; confidence=high
Rice	`Os08g0439150` - identity=65; qcov=0.5; evalue=7.88e-54; confidence=medium
GO	GO:0000151 (ubiquitin ligase complex); GO:0031624 (ubiquitin conjugating enzyme binding); GO:0032182 (ubiquitin-like protein binding); GO:0045116 (protein neddylation); GO:0051443 (positive regulation of ubiquitin-protein transferase activity); GO:0097602 (cullin family protein binding)
KEGG	-
Pfam	PF03556 (Cullin_binding)
InterPro	-
eggNOG	-
NR	GeneID:131021742

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	0.80000	`XP_057807006.1`
2	Nucleus	细胞核	0.60000	`XP_057807006.1`
3	Cytoskeleton	细胞骨架	0.20000	`XP_057807006.1`
4	Spindle pole	Spindle pole	0.20000	`XP_057807006.1`
5	Chromosome	染色体	0.00000	`XP_057807006.1`

进入亚细胞定位查询

EMS 诱变突变

该基因暂未检索到已上线的精选 EMS CDS / LoF 突变，或 EMS 突变库仍在构建。

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057807006.1

234 aa

117

234

Cullin_binding

PF03556 Cullin_binding 110-224 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057807006.1`	Pfam	`PF03556`	Cullin_binding	Family	110	224	1.8e-30	106.4	Cullin binding

cDNA / CDS / Protein 序列

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每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

1 records

下载 cDNA FASTA

XM_057951023.1
TAACAATAAAGAATGAATTTTTAATATTTGTGTGTGATAAAGTCTATACTTTAATTTCCTAGCCTCCATTTCACTAAGGTGGTCTAATTGTTGAACATATTCCATTTCATTTCATCAATCAATACTTAACTAATACCCATACAAATAACAAAGGTACATTAATAAATAAATAATCAAGCAGAAAAGAGAGCACTAGCAGCAGCAATAGTGATCTGTGATTTGGGCTGCAAAGCCACTTTACCTAAAACGTCCATCATTTT...

CDS

1 records

下载 CDS FASTA

LOC131021742
ATGACTCGCGCCTCCAAGAGAAAATCGGATAATCAAACCTCTGCGCCTGTCAAAACTGCCCGCGTCGACTCTGTTCGTTCCGCATCCAGCAAAGCTGCAAAGAAAGTGGAGGAACGTATTGATGAACTTTACACAAAATATGCTAATCAGTCGTCATGTGTGATTGATCCAGAAGGGGTTGAAGCATTATGCTCTGATTTAAAGGTGGACTGTACTGATGTTAGGATATTGGTGCTAGCTTGGAAAATGAATGCTCAGAA...

Protein

1 records

下载 Protein FASTA

XP_057807006.1
MTRASKRKSDNQTSAPVKTARVDSVRSASSKAAKKVEERIDELYTKYANQSSCVIDPEGVEALCSDLKVDCTDVRILVLAWKMNAQKQGYFTQDEWRRGLKTLKADTITKLKKSLPELEKEALKSENFDDFYRYAFRYCLTEDNKKCLDIETACVLLQLVLGVQYQDQVDSFIKFLKSQSDYKVINMDQWTNFFRFCQEISFPDLNNYDTDEAWPLILDNFVDWTKRQENVVSA

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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