当前解析结果
SmilChr04G002718| 统一新 Gene ID | SmilChr04G002718 |
|---|---|
| 名称 | SmilChr04G002718 |
| 描述 | uncharacterized SmilChr04G002718 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 42819954 - 42820708 / + |
| NCBI Gene ID | LOC131021821 |
|---|---|
| GeneID | 131021821 |
| locus_tag | - |
| NCBI Name | LOC131021821 |
| 原始查询 | SmilChr04G002718 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | nitric oxide synthase-interacting protein [Source:NCBI gene (formerly Entrezgene);Acc:836627]; symbol=AT5G65030; hit=AT5G65030; species=arabidopsis; confidence=medium |
| 产物 | nitric oxide synthase-interacting protein [Source:NCBI gene (formerly Entrezgene);Acc:836627]; symbol=AT5G65030; hit=AT5G65030; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G65030 (AT5G65030)nitric oxide synthase-interacting protein [Source:NCBI gene (formerly Entrezgene);Acc:836627] identity=37.2; qcov=1.03; evalue=1.55e-34; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131021821 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057807095.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057807095.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057807095.1 |
| 4 | Cell membrane | 细胞膜 | 0.20000 | XP_057807095.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057807095.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:42820104 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B99,C69 |
Chr4:42820206 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B108 |
Chr4:42820249 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B101,B105,B135,C74 |
Chr4:42820330 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B58,C85 |
Chr4:42820462 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B122,C11,C69 |
Chr4:42820540 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr4:42820555 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr4:42820573 |
T |
TC |
1bp_insertion | frameshift_variant | 169 | A10,A11,A13,A15,A16,A18,A2,A20,A21,A22,A24,A3,A4,A5,A8,A9,B1,B101,B102,B103,B105,B106,B107,B108,B109,B111,B114,B115,B117,B118,B119,B12,B120,B121,B122,B124,B126,B13,B130,B133,B134,B135,B136,B137,B139,B14,B15,B16,B17,B19,B2,B22,B23,B25,B26,B27,B29,B3,B30,B32,B34,B35,B36,B38,B39,B4,B40,B41,B48,B49,B50,B52,B55,B57,B59,B60,B61,B62,B63,B64,B65,B66,B70,B71,B74,B76,B77,B78,B79,B80,B82,B83,B84,B87,B9,B91,B93,B95,B97,B98,C1,C10,C11,C12,C13,C14,C15,C16,C17,C19,C2,C20,C21,C24,C25,C27,C28,C29,C30,C31,C32,C34,C35,C36,C37,C41,C42,C43,C45,C46,C47,C48,C49,C5,C51,C53,C54,C57,C58,C59,C6,C60,C61,C62,C64,C65,C66,C67,C68,C69,C70,C72,C74,C77,C78,C8,C80,C81,C84,C85,C86,D1,D10,D11,D2,D4,D5,D6,D8 |
Chr4:42820575 |
T |
TA |
1bp_insertion | frameshift_variant | 32 | A10,A2,A20,A8,B1,B103,B13,B139,B14,B15,B17,B19,B36,B57,B59,B64,B74,B76,B87,B97,C1,C15,C28,C49,C51,C57,C67,C8,C81,D1,D5,D6 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。