Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G002793`

染色体: Chr04 坐标: 43804021-43806403 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G002793`
名称	SmilChr04G002793
描述	mitochondrial carnitine/acylcarnitine carrier-like protein
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	43804021 - 43806403 / `-`

ID 对照

NCBI Gene ID	`LOC131021889`
GeneID	`131021889`
locus_tag	`-`
NCBI Name	`LOC131021889`
原始查询	`SmilChr04G002793`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	mitochondrial carnitine/acylcarnitine carrier-like protein
产物	mitochondrial carnitine/acylcarnitine carrier-like protein
Arabidopsis	`AT5G46800` (BOU) Mitochondrial substrate carrier family protein [Source:NCBI gene (formerly Entrezgene);Acc:834724] identity=77.5; qcov=1.01; evalue=2.29e-172; confidence=high
Rice	`Os10g0573800` - identity=75.9; qcov=1.01; evalue=3.84e-151; confidence=high
GO	GO:0000064 (L-ornithine transmembrane transporter activity); GO:1990575 (mitochondrial L-ornithine transmembrane transport)
KEGG	-
Pfam	PF00153 (Mito_carr)
InterPro	-
eggNOG	-
NR	GeneID:131021889

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057807197.1`
2	Mitochondrion membrane	线粒体膜	1.00000	`XP_057807197.1`
3	Mitochondrion inner membrane	线粒体内膜	1.00000	`XP_057807197.1`
4	Nucleus	细胞核	0.00000	`XP_057807197.1`
5	Chromosome	染色体	0.00000	`XP_057807197.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:43804392`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B66
`Chr4:43804435`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C17
`Chr4:43804992`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B90,B92,C31
`Chr4:43805129`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C35

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057807197.1

304 aa

152

304

Mito_carr

PF00153 Mito_carr 4-96 aa PF00153 Mito_carr 102-207 aa PF00153 Mito_carr 220-302 aa

XP_057807199.1

304 aa

152

304

Mito_carr

PF00153 Mito_carr 4-96 aa PF00153 Mito_carr 102-207 aa PF00153 Mito_carr 220-302 aa

XP_057807200.1

304 aa

152

304

Mito_carr

PF00153 Mito_carr 4-96 aa PF00153 Mito_carr 102-207 aa PF00153 Mito_carr 220-302 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057807197.1`	Pfam	`PF00153`	Mito_carr	Repeat	4	96	5.5e-62	206.3	Mitochondrial carrier protein
`XP_057807197.1`	Pfam	`PF00153`	Mito_carr	Repeat	102	207	5.5e-62	206.3	Mitochondrial carrier protein
`XP_057807197.1`	Pfam	`PF00153`	Mito_carr	Repeat	220	302	5.5e-62	206.3	Mitochondrial carrier protein
`XP_057807199.1`	Pfam	`PF00153`	Mito_carr	Repeat	4	96	5.5e-62	206.3	Mitochondrial carrier protein
`XP_057807199.1`	Pfam	`PF00153`	Mito_carr	Repeat	102	207	5.5e-62	206.3	Mitochondrial carrier protein
`XP_057807199.1`	Pfam	`PF00153`	Mito_carr	Repeat	220	302	5.5e-62	206.3	Mitochondrial carrier protein
`XP_057807200.1`	Pfam	`PF00153`	Mito_carr	Repeat	4	96	5.5e-62	206.3	Mitochondrial carrier protein
`XP_057807200.1`	Pfam	`PF00153`	Mito_carr	Repeat	102	207	5.5e-62	206.3	Mitochondrial carrier protein
`XP_057807200.1`	Pfam	`PF00153`	Mito_carr	Repeat	220	302	5.5e-62	206.3	Mitochondrial carrier protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057951217.1
CCCAACAACTCCGGCCGCATCTGCCTCATCAACTTTCACCTGGTTTGCATCTCTCCAAATTCCCATCTTTGTCGTGTCTTAGATTTCACTCATGTGGCCCTCCAAGATTCTTGCTCTGCATCTATATTGCATCTCTCTCTCTCTCTCTCCATCACCAACCACCACTTTTGCATTTTATTCGTTGACATCGTCAACTTCCTACCCATGATTCTTGCGGGCAACCACGCCCTTAATACGCTAGCTCTCACTGATGGGTGATG...

XM_057951216.1
CAACAACTCCGGCCGCATCTGCCTCATCAACTTTCACCTGGTTTGCATCTCTCCAAATTCCCATCTTTGTCGTGTCTTAGATTTCACTCATGTGGCCCTCCAAGATTCTTGCTCTGCATCTATATTGCATCTCTCTCTCTCTCTCTCCATCACCAACCACCACTTTTGCATTTTATTCGTTGACATCGTCAACTTCCTACCCATGATTCTTGCGGGCAACCACGCCCTTAATACGCTAGCTCTCACTGTGCGGAAGGGGC...

CDS

3 records

下载 CDS FASTA

LOC131021889
ATGGGTGATGTAGCTAAAGATCTAAGCGCTGGGACTCTGGGAGGGGCAGCACAGTTGATATGCGGGCATCCGTTTGACACCATTAAGGTCAAGCTCCAAAGTCAACCTGTTCCGCTTCCTGGACAGGCTCCAAGATATTCTGGTGCCATAGATGCCGTGAAGCAAACATTAGCTGCCGAAGGTCCAAGGGGTTTGTACAAAGGCATGGGAGCCCCGCTTGCTACTGTGGCAGCCTTTAATGCAGTGCTCTTCACTGTTCG...

Protein

3 records

下载 Protein FASTA

XP_057807197.1
MGDVAKDLSAGTLGGAAQLICGHPFDTIKVKLQSQPVPLPGQAPRYSGAIDAVKQTLAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEAFLQSSPGTPLTVGQQVVCGAGAGVAVSFLACPTELIKCRLQAQSSIATIGLAVPSGVGVPGAAVAVKYGGPMDVARHVLRSEGGARGLFNPTFAREIPGNAAMFGVYEGLKQYLAGGQDTSSLGRGSLILAGGLAGASYWGCVYPTDVVKSVLQVDDYKNPKYSGSVD...

XP_057807199.1
MGDVAKDLSAGTLGGAAQLICGHPFDTIKVKLQSQPVPLPGQAPRYSGAIDAVKQTLAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEAFLQSSPGTPLTVGQQVVCGAGAGVAVSFLACPTELIKCRLQAQSSIATIGLAVPSGVGVPGAAVAVKYGGPMDVARHVLRSEGGARGLFNPTFAREIPGNAAMFGVYEGLKQYLAGGQDTSSLGRGSLILAGGLAGASYWGCVYPTDVVKSVLQVDDYKNPKYSGSVD...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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