当前解析结果
SmilChr04G002905| 统一新 Gene ID | SmilChr04G002905 |
|---|---|
| 名称 | SmilChr04G002905 |
| 描述 | uncharacterized SmilChr04G002905 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 45323556 - 45324494 / - |
| NCBI Gene ID | LOC131023502 |
|---|---|
| GeneID | 131023502 |
| locus_tag | - |
| NCBI Name | LOC131023502 |
| 原始查询 | SmilChr04G002905 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os11g0282700; species=rice; confidence=low |
| 产物 | hit=Os11g0282700; species=rice; confidence=low |
| Arabidopsis | AT1G66235 (AT1G66235)no-apical-meristem-associated carboxy-terminal domain protein [Source:NCBI gene (formerly Entrezgene);Acc:842939] identity=21.2; qcov=0.423; evalue=2.78e-08; confidence=weak |
| Rice | Os11g0282700- identity=26.1; qcov=0.772; evalue=1.2e-16; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023502 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057809028.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057809028.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057809028.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057809028.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057809028.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:45323585 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B41 |
Chr4:45323603 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
Chr4:45323613 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C38 |
Chr4:45323681 |
G |
A |
EMS_canonical_SNV | stop_gained | 58 | A14,A16,A21,A22,A3,A4,B101,B105,B119,B12,B121,B123,B124,B134,B135,B137,B140,B16,B24,B26,B29,B30,B41,B51,B53,B56,B59,B63,B65,B71,B78,B81,B83,B86,B89,B93,B98,C12,C20,C21,C22,C24,C26,C30,C38,C44,C45,C46,C47,C5,C52,C53,C58,C60,C65,C84,C85,C86 |
Chr4:45323713 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C16,D3,D7 |
Chr4:45323714 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B13,B3,B67,C50 |
Chr4:45323718 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B81 |
Chr4:45323721 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A22 |
Chr4:45323741 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B17,C11,C69 |
Chr4:45323753 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A13,A22,C36,C9 |
Chr4:45323788 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C77 |
Chr4:45323826 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B81,C6,D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。