当前解析结果
SmilChr04G003157| 统一新 Gene ID | SmilChr04G003157 |
|---|---|
| 名称 | SmilChr04G003157 |
| 描述 | uncharacterized SmilChr04G003157 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 48201919 - 48202602 / + |
| NCBI Gene ID | LOC131023536 |
|---|---|
| GeneID | 131023536 |
| locus_tag | - |
| NCBI Name | LOC131023536 |
| 原始查询 | SmilChr04G003157 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | membrane-associated kinase regulator [Source:NCBI gene (formerly Entrezgene);Acc:843025]; symbol=AT1G67050; hit=AT1G67050; species=arabidopsis; confidence=medium |
| 产物 | membrane-associated kinase regulator [Source:NCBI gene (formerly Entrezgene);Acc:843025]; symbol=AT1G67050; hit=AT1G67050; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G67050 (AT1G67050)membrane-associated kinase regulator [Source:NCBI gene (formerly Entrezgene);Acc:843025] identity=44.8; qcov=1.18; evalue=2.46e-45; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023536 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057809064.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057809064.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057809064.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057809064.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057809064.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:48201924 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B54 |
Chr4:48201981 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr4:48202072 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B71,B90 |
Chr4:48202080 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B44,D10 |
Chr4:48202090 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B54 |
Chr4:48202091 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | B90 |
Chr4:48202091 |
AC |
A |
1bp_deletion | CDS_variant | 1 | B90 |
Chr4:48202093 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B90 |
Chr4:48202093 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B90 |
Chr4:48202113 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B90 |
Chr4:48202128 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B90 |
Chr4:48202161 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B90 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。