当前解析结果
SmilChr04G003181| 统一新 Gene ID | SmilChr04G003181 |
|---|---|
| 名称 | SmilChr04G003181 |
| 描述 | uncharacterized SmilChr04G003181 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 48521543 - 48522535 / - |
| NCBI Gene ID | LOC131023540 |
|---|---|
| GeneID | 131023540 |
| locus_tag | - |
| NCBI Name | LOC131023540 |
| 原始查询 | SmilChr04G003181 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DNAse I-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:840968]; symbol=AT1G43760; hit=AT1G43760; species=arabidopsis; confidence=low |
| 产物 | DNAse I-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:840968]; symbol=AT1G43760; hit=AT1G43760; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G43760 (AT1G43760)DNAse I-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:840968] identity=28.1; qcov=0.788; evalue=7.51e-23; confidence=low |
| Rice | Os10g0351414- identity=21.4; qcov=0.936; evalue=2.73e-15; confidence=weak |
| GO | GO:0003824 (catalytic activity) |
| KEGG | - |
| Pfam | PF03372 (Exo_endo_phos); PF14529 (Exo_endo_phos_2) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023540 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057809069.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057809069.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057809069.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057809069.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057809069.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057809069.1PF03372
Exo_endo_phos 24-189 aa
PF14529
Exo_endo_phos_2 67-193 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057809069.1 |
Pfam | PF03372 |
Exo_endo_phos | Domain | 24 | 189 | 1.2e-06 | 29.2 | Endonuclease/Exonuclease/phosphatase family |
XP_057809069.1 |
Pfam | PF14529 |
Exo_endo_phos_2 | Domain | 67 | 193 | 2.5e-11 | 44.2 | Endonuclease-reverse transcriptase |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。