当前解析结果
SmilChr04G003460| 统一新 Gene ID | SmilChr04G003460 |
|---|---|
| 名称 | SmilChr04G003460 |
| 描述 | uncharacterized SmilChr04G003460 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 51073958 - 51079592 / + |
| NCBI Gene ID | LOC131020354 |
|---|---|
| GeneID | 131020354 |
| locus_tag | - |
| NCBI Name | LOC131020354 |
| 原始查询 | SmilChr04G003460 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:830689]; symbol=AT5G07950; hit=AT5G07950; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:830689]; symbol=AT5G07950; hit=AT5G07950; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G07950 (AT5G07950)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:830689] identity=54.4; qcov=0.874; evalue=4.77e-93; confidence=high |
| Rice | Os03g0213200- identity=47.1; qcov=0.88; evalue=1.14e-73; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131020354 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057805091.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057805091.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057805091.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057805091.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057805091.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:51074972 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B97 |
Chr4:51075054 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A25,B36 |
Chr4:51077985 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B9,C77 |
Chr4:51078245 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C20 |
Chr4:51079363 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B110,B118,B65,C58 |
Chr4:51079389 |
C |
CA |
1bp_insertion | frameshift_variant | 3 | A15,B107,B117 |
Chr4:51079389 |
C |
CA |
1bp_insertion | CDS_variant | 3 | A15,B107,B117 |
Chr4:51079392 |
CTT |
C |
2bp_deletion | frameshift_variant | 21 | A1,A14,A16,B100,B120,B139,B21,B50,B54,B59,B7,B86,B87,B94,C18,C27,C36,C58,C60,C83,C86 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。