当前解析结果
SmilChr04G003477| 统一新 Gene ID | SmilChr04G003477 |
|---|---|
| 名称 | SmilChr04G003477 |
| 描述 | uncharacterized SmilChr04G003477 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 51232046 - 51234859 / + |
| NCBI Gene ID | LOC131020371 |
|---|---|
| GeneID | 131020371 |
| locus_tag | - |
| NCBI Name | LOC131020371 |
| 原始查询 | SmilChr04G003477 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | HNH endonuclease domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:838449]; symbol=AT1G18680; hit=AT1G18680; species=arabidopsis; confidence=high |
| 产物 | HNH endonuclease domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:838449]; symbol=AT1G18680; hit=AT1G18680; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G18680 (AT1G18680)HNH endonuclease domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:838449] identity=75.8; qcov=0.874; evalue=4.91e-90; confidence=high |
| Rice | Os10g0335200- identity=69.9; qcov=0.891; evalue=1.35e-84; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131020371 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 0.40000 | XP_057805121.1 |
| 2 | Mitochondrion | 线粒体 | 0.40000 | XP_057805121.1 |
| 3 | Mitochondrion intermembrane space | Mitochondrion intermembrane space | 0.20000 | XP_057805121.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057805121.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057805121.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:51232198 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B9,C73,C77 |
Chr4:51232258 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B104,B117,C8 |
Chr4:51232852 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr4:51232880 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C15 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。