当前解析结果
SmilChr04G003488| 统一新 Gene ID | SmilChr04G003488 |
|---|---|
| 名称 | SmilChr04G003488 |
| 描述 | uncharacterized SmilChr04G003488 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 51330217 - 51341610 / + |
| NCBI Gene ID | LOC131020380 |
|---|---|
| GeneID | 131020380 |
| locus_tag | - |
| NCBI Name | LOC131020380 |
| 原始查询 | SmilChr04G003488 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836257]; symbol=AT5G61360; hit=AT5G61360; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836257]; symbol=AT5G61360; hit=AT5G61360; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G61360 (AT5G61360)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836257] identity=29.2; qcov=0.845; evalue=1.3e-10; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131020380 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.40000 | XP_057805132.1 |
| 2 | Nucleus membrane | 核膜 | 0.40000 | XP_057805132.1 |
| 3 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057805132.1 |
| 4 | Endoplasmic reticulum membrane | 内质网膜 | 0.20000 | XP_057805132.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057805132.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:51340602 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C55 |
Chr4:51340727 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A22,B6,C16,C33,C58 |
Chr4:51340836 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A22,B37,B6,C33,C63 |
Chr4:51340930 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B108 |
Chr4:51340944 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A18,A22,C16,C33,C63 |
Chr4:51340984 |
GC |
G |
1bp_deletion | frameshift_variant | 5 | A22,B6,C16,C33,C63 |
Chr4:51340984 |
GC |
G |
1bp_deletion | CDS_variant | 5 | A22,B6,C16,C33,C63 |
Chr4:51341069 |
CG |
C |
1bp_deletion | frameshift_variant | 6 | A22,B37,B6,C16,C33,C63 |
Chr4:51341092 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A22,B37,C16,C33,C63 |
Chr4:51341097 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A22,B37,C16,C33,C63 |
Chr4:51341113 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A22,B37,C16,C33,C63 |
Chr4:51341137 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A22,B37,C16,C33,C63 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。