当前解析结果
SmilChr04G003632| 统一新 Gene ID | SmilChr04G003632 |
|---|---|
| 名称 | SmilChr04G003632 |
| 描述 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 52826978 - 52829790 / - |
| NCBI Gene ID | LOC131020506 |
|---|---|
| GeneID | 131020506 |
| locus_tag | - |
| NCBI Name | LOC131020506 |
| 原始查询 | SmilChr04G003632 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform |
| 产物 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform |
| Arabidopsis | AT5G03470 (ATB' ALPHA)Protein phosphatase 2A regulatory B subunit family protein [Source:NCBI gene (formerly Entrezgene);Acc:831828] identity=65.4; qcov=0.982; evalue=0; confidence=high |
| Rice | Os03g0681800 (OSJNBb0070O09.3)- identity=65.5; qcov=0.855; evalue=0; confidence=high |
| GO | GO:0000159 (protein phosphatase type 2A complex); GO:0007165 (signal transduction); GO:0019888 (protein phosphatase regulator activity) |
| KEGG | smil03015 (mRNA surveillance pathway - Salvia miltiorrhiza (redroot sage)); smil04382 (Cornified envelope formation - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF01603 (B56) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131020506 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057805338.1 |
| 2 | Nucleus | 细胞核 | 0.80000 | XP_057805338.1 |
| 3 | Cytosol | 细胞质基质 | 0.80000 | XP_057805338.1 |
| 4 | Nucleoplasm | 核质 | 0.20000 | XP_057805338.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057805338.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057805338.1PF01603
B56 78-489 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057805338.1 |
Pfam | PF01603 |
B56 | Repeat | 78 | 489 | 2.6e-180 | 600.5 | Protein phosphatase 2A regulatory B subunit (B56 family) |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。