Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr04G003748`

染色体: Chr04 坐标: 53766876-53769333 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr04G003748`
名称	SmilChr04G003748
描述	uncharacterized SmilChr04G003748
染色体 / SeqID	Chr04 / NC_080390.1
坐标与链方向	53766876 - 53769333 / `+`

ID 对照

NCBI Gene ID	`LOC131020631`
GeneID	`131020631`
locus_tag	`-`
NCBI Name	`LOC131020631`
原始查询	`SmilChr04G003748`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	cytochrome P450 family protein [Source:NCBI gene (formerly Entrezgene);Acc:825230]; symbol=AT3G60590; hit=AT3G60590; species=arabidopsis; confidence=high
产物	cytochrome P450 family protein [Source:NCBI gene (formerly Entrezgene);Acc:825230]; symbol=AT3G60590; hit=AT3G60590; species=arabidopsis; confidence=high
Arabidopsis	`AT3G60590` (AT3G60590) cytochrome P450 family protein [Source:NCBI gene (formerly Entrezgene);Acc:825230] identity=57.4; qcov=0.798; evalue=3.07e-115; confidence=high
Rice	`Os04g0534500` - identity=53.1; qcov=0.79; evalue=5.08e-98; confidence=high
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131020631

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057805547.1`
2	Chloroplast membrane	叶绿体膜	1.00000	`XP_057805547.1`
3	Nucleus	细胞核	0.00000	`XP_057805547.1`
4	Chromosome	染色体	0.00000	`XP_057805547.1`
5	Centromere	着丝粒	0.00000	`XP_057805547.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr4:53768252`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D6
`Chr4:53768256`	`G`	`GT`	1bp_insertion	frameshift_variant	137	A1,A10,A13,A14,A16,A18,A19,A21,A22,A23,A25,A6,A7,A8,B1,B102,B104,B106,B107,B108,B109,B111,B112,B114,B115,B119,B12,B121,B124,B126,B128,B129,B136,B137,B139,B14,B140,B17,B19,B2,B20,B22,B23,B24,B26,B28,B32,B33,B34,B36,B38,B39,B42,B44,B47,B5,B50,B54,B55,B56,B58,B59,B6,B63,B64,B67,B68,B7,B74,B75,B76,B77,B78,B83,B85,B87,B88,B92,B93,B98,B99,C11,C15,C17,C18,C22,C24,C26,C27,C28,C29,C3,C31,C32,C34,C36,C38,C39,C40,C41,C42,C43,C44,C46,C48,C51,C52,C54,C55,C56,C58,C61,C62,C63,C65,C66,C69,C70,C71,C72,C73,C74,C75,C76,C78,C8,C80,C81,C82,C84,C85,C86,C87,C9,D2,D3,D4
`Chr4:53768321`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A11,B46
`Chr4:53768331`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B99,C86
`Chr4:53768413`	`C`	`CGG`	2bp_insertion	frameshift_variant	1	D6
`Chr4:53768413`	`C`	`CGG`	2bp_insertion	CDS_variant	1	D6
`Chr4:53768513`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B33,B52
`Chr4:53768642`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A24,B81,C52
`Chr4:53768694`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B129,B139,C6,C7,C78
`Chr4:53768763`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B102,B134
`Chr4:53768786`	`TC`	`T`	1bp_deletion	frameshift_variant	9	A22,A6,B112,B135,B17,B25,B32,C14,C62
`Chr4:53768793`	`CAG`	`C`	2bp_deletion	frameshift_variant	9	A22,A6,B112,B135,B17,B25,B32,C14,C62

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057949564.1
GCACCACAAAAGTTGACAATTGACAGCTTATTTTCATTTCACCAATTTCAGTAACCACCCAATCAATGACAAATATCGTAAAATACTATCCACTTAAATTAAATAAAAGAATTCCAAATCAATTAGAGTTAGTCCAATTTTGAAAATCTTGTCCAGAAAAAAGAATTTCTAGAACTCCCCAAAAATTCCGAAAGCCGACTACTTCTGGCCGCTCAGAGTAGCTGATGATTCTTCATAGTTTGTCTCAAATTCGGATTTTG...

XM_057949565.1
TCAGTAACCACCCAATCAATGACAAATATCGTAAAATACTATCCACTTAAATTAAATAAAAGAATTCCAAATCAATTAGAGTTAGTCCAATTTTGAAAATCTTGTCCAGAAAAAAGAATTTCTAGAACTCCCCAAAAATTCCGAAAGCCGACTACTTCTGGCCGCTCAGAGTAGCTGATGATTCTTCATAGTTTGTCTCAAATTCGGATTTTGATTGCACTCTGCCTTTCTTCGGTAACTGGAAGCTGAATATCAAGCTT...

CDS

2 records

下载 CDS FASTA

LOC131020631
ATGGCATTGTTTACCCAGTCTCCATCCAGTAATCCAGTACTTACCGTTTCCCGATTACATCATAGACGCCTTAAGTTGTTTAAATCTCAGAGTCTGTTTGGCAGATGCAACTTGCCATATGTTAACAGTGGTCTTCAGATCATATGTTGTGCTAACACATCTCGATGGGAACCGGCTCCAGTAACATATGTTCCCGAGAAAGAAGGTGCGTTGCTCAAAGAGAGTAGCAATATCTTTGAAACCATCACTTCTTCGAGTGA...

Protein

2 records

下载 Protein FASTA

XP_057805547.1
MALFTQSPSSNPVLTVSRLHHRRLKLFKSQSLFGRCNLPYVNSGLQIICCANTSRWEPAPVTYVPEKEGALLKESSNIFETITSSSEAAEASITKTEHRDVDANEQPIMQFHYLRQPLWLLGPVLLLVTGVVPTLWLPISSIFLGPNIASLLSLTGLDCIFNLGATLFLLMADSTARPNNDTEACSSKPPSSYRFWNIIANVAGFIIPLAMLVASQKGLLQPQLPLISYAVLLGPYFLLLLVQLVTEMLTWHWQSPVWLV...

XP_057805548.1
MALFTQSPSSNPVLTVSRLHHRRLKLFKSQSLFGRCNLPYVNSGLQIICCANTSRWEPAPVTYVPEKEGALLKESSNIFETITSSSEAAEASITKTEHRDVDANEQPIMQFHYLRQPLWLLGPVLLLVTGVVPTLWLPISSIFLGPNIASLLSLTGLDCIFNLGATLFLLMADSTARPNNDTEACSSKPPSSYRFWNIIANVAGFIIPLAMLVASQKGLLQPQLPLISYAVLLGPYFLLLLVQLVTEMLTWHWQSPVWLV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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