当前解析结果
SmilChr04G003795| 统一新 Gene ID | SmilChr04G003795 |
|---|---|
| 名称 | SmilChr04G003795 |
| 描述 | uncharacterized SmilChr04G003795 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 54128786 - 54131105 / - |
| NCBI Gene ID | LOC131020656 |
|---|---|
| GeneID | 131020656 |
| locus_tag | - |
| NCBI Name | LOC131020656 |
| 原始查询 | SmilChr04G003795 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:825256]; symbol=AT3G60850; hit=AT3G60850; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:825256]; symbol=AT3G60850; hit=AT3G60850; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G60850 (AT3G60850)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:825256] identity=61.5; qcov=1.03; evalue=0; confidence=high |
| Rice | Os03g0247100- identity=54; qcov=0.93; evalue=0; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131020656 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057805605.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057805605.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057805605.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057805605.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057805605.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:54129019 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B138,C23,D10 |
Chr4:54129057 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C40 |
Chr4:54129600 |
ACC |
A |
2bp_deletion | frameshift_variant | 1 | C32 |
Chr4:54129600 |
ACC |
A |
2bp_deletion | CDS_variant | 1 | C32 |
Chr4:54129649 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B108,B127,C12,C79 |
Chr4:54129712 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B28 |
Chr4:54130123 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B106,B62 |
Chr4:54130138 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B132 |
Chr4:54130300 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr4:54130318 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr4:54130576 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr4:54130594 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B136 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。