当前解析结果
SmilChr04G004044| 统一新 Gene ID | SmilChr04G004044 |
|---|---|
| 名称 | SmilChr04G004044 |
| 描述 | probable membrane-associated kinase regulator 1 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 55666428 - 55667638 / + |
| NCBI Gene ID | LOC131020915 |
|---|---|
| GeneID | 131020915 |
| locus_tag | - |
| NCBI Name | LOC131020915 |
| 原始查询 | SmilChr04G004044 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | probable membrane-associated kinase regulator 1 |
| 产物 | probable membrane-associated kinase regulator 1 |
| Arabidopsis | AT5G26230 (MAKR1)membrane-associated kinase regulator [Source:NCBI gene (formerly Entrezgene);Acc:832692] identity=46; qcov=1.02; evalue=1.11e-54; confidence=high |
| Rice | Os05g0390600- identity=37.1; qcov=1.06; evalue=3.09e-25; confidence=medium |
| GO | GO:0005886 (plasma membrane); GO:0019210 (kinase inhibitor activity) |
| KEGG | - |
| Pfam | PF30743 (BKI1) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131020915 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057805946.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057805946.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057805946.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057805946.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057805946.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:55666717 |
T |
TC |
1bp_insertion | frameshift_variant | 5 | B12,B88,C28,C30,C75 |
Chr4:55666717 |
T |
TC |
1bp_insertion | CDS_variant | 5 | B12,B88,C28,C30,C75 |
Chr4:55666909 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B89 |
Chr4:55666963 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C68 |
Chr4:55666982 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B3,B86,C25,C31 |
Chr4:55667130 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B93 |
Chr4:55667142 |
CCG |
C |
2bp_deletion | frameshift_variant | 45 | A2,A21,A8,B1,B101,B109,B113,B12,B120,B124,B130,B134,B136,B21,B24,B29,B31,B32,B33,B35,B40,B46,B60,B67,B68,B73,B87,C12,C13,C15,C26,C48,C53,C54,C56,C60,C61,C65,C72,C76,C78,C82,C87,D1,D3 |
Chr4:55667145 |
TC |
T |
1bp_deletion | frameshift_variant | 47 | A2,A20,A21,A8,B1,B101,B109,B113,B12,B120,B124,B130,B134,B136,B21,B24,B29,B31,B32,B33,B35,B40,B46,B60,B67,B68,B73,B85,B87,C12,C13,C15,C26,C48,C53,C54,C56,C60,C61,C65,C72,C76,C78,C82,C87,D1,D3 |
Chr4:55667316 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | B62 |
Chr4:55667316 |
AC |
A |
1bp_deletion | CDS_variant | 1 | B62 |
Chr4:55667347 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B101,B135,B140 |
Chr4:55667354 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A23 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057805946.1PF30743
BKI1 17-204 aa
PF30743
BKI1 226-315 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057805946.1 |
Pfam | PF30743 |
BKI1 | Family | 17 | 204 | 8.6e-22 | 78.7 | BRI1 kinase inhibitor 1 |
XP_057805946.1 |
Pfam | PF30743 |
BKI1 | Family | 226 | 315 | 8.6e-22 | 78.7 | BRI1 kinase inhibitor 1 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。