当前解析结果
SmilChr04G004130| 统一新 Gene ID | SmilChr04G004130 |
|---|---|
| 名称 | SmilChr04G004130 |
| 描述 | uncharacterized SmilChr04G004130 |
| 染色体 / SeqID | Chr04 / NC_080390.1 |
| 坐标与链方向 | 56129265 - 56131941 / + |
| NCBI Gene ID | LOC131021006 |
|---|---|
| GeneID | 131021006 |
| locus_tag | - |
| NCBI Name | LOC131021006 |
| 原始查询 | SmilChr04G004130 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827291]; symbol=AT4G16060; hit=AT4G16060; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827291]; symbol=AT4G16060; hit=AT4G16060; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G16060 (AT4G16060)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827291] identity=78.1; qcov=0.815; evalue=4.56e-132; confidence=high |
| Rice | Os05g0358400- identity=63.2; qcov=0.99; evalue=4.58e-122; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131021006 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057806059.1 |
| 2 | Chloroplast stroma | 叶绿体基质 | 0.80000 | XP_057806059.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057806059.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057806059.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057806059.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr4:56129442 |
CT |
C |
1bp_deletion | frameshift_variant | 23 | A3,B105,B11,B119,B2,B27,B41,B67,B76,B8,B85,B89,B9,B93,C32,C54,C68,C76,C78,C83,D6,D7,D8 |
Chr4:56129463 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B49,B73 |
Chr4:56129476 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A1,B16,C39 |
Chr4:56129516 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B59,B7,B76 |
Chr4:56129537 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C43,C52 |
Chr4:56129539 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr4:56130427 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A5,B53,B98 |
Chr4:56131195 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A1,B16,B48,C39 |
Chr4:56131281 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A15,C62 |
Chr4:56131573 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B128 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。