Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G000031`

染色体: Chr05 坐标: 152556-156118 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G000031`
名称	SmilChr05G000031
描述	kinase-interacting family protein-like
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	152556 - 156118 / `+`

ID 对照

NCBI Gene ID	`LOC131026519`
GeneID	`131026519`
locus_tag	`-`
NCBI Name	`LOC131026519`
原始查询	`SmilChr05G000031`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	kinase-interacting family protein-like
产物	kinase-interacting family protein-like
Arabidopsis	`AT3G17680` (AT3G17680) Kinase interacting (KIP1-like) family protein [Source:NCBI gene (formerly Entrezgene);Acc:821035] identity=35.6; qcov=0.641; evalue=3.03e-30; confidence=medium
Rice	`Os03g0110500` (OSJNBb0043C10.3) - identity=45.1; qcov=0.713; evalue=5.18e-59; confidence=high
GO	GO:0003779 (actin binding)
KEGG	-
Pfam	PF07765 (KIP1)
InterPro	-
eggNOG	-
NR	GeneID:131026519

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	0.60000	`XP_057812379.1`
2	Nucleus membrane	核膜	0.40000	`XP_057812379.1`
3	Cell membrane	细胞膜	0.40000	`XP_057812379.1`
4	Chromosome	染色体	0.00000	`XP_057812379.1`
5	Centromere	着丝粒	0.00000	`XP_057812379.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:153787`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B104,B106,C21
`Chr5:154984`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B97
`Chr5:155079`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B113
`Chr5:155129`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C6
`Chr5:155130`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B54
`Chr5:155143`	`AG`	`A`	1bp_deletion	frameshift_variant	5	B109,B68,B76,C75,C9
`Chr5:155143`	`AG`	`A`	1bp_deletion	CDS_variant	5	B109,B68,B76,C75,C9
`Chr5:155145`	`CAG`	`C`	2bp_deletion	frameshift_variant	5	B109,B68,B76,C75,C9
`Chr5:155145`	`CAG`	`C`	2bp_deletion	CDS_variant	5	B109,B68,B76,C75,C9
`Chr5:155210`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B42,B43,C17,C35,C44
`Chr5:155303`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B97
`Chr5:155366`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B54

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057812379.1

373 aa

186

373

KIP1

PF07765 KIP1 29-93 aa

XP_057812380.1

373 aa

186

373

KIP1

PF07765 KIP1 29-93 aa

XP_057812381.1

373 aa

186

373

KIP1

PF07765 KIP1 29-93 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057812379.1`	Pfam	`PF07765`	KIP1	Family	29	93	8.2e-10	39.4	KIP1-like protein
`XP_057812380.1`	Pfam	`PF07765`	KIP1	Family	29	93	8.2e-10	39.4	KIP1-like protein
`XP_057812381.1`	Pfam	`PF07765`	KIP1	Family	29	93	8.2e-10	39.4	KIP1-like protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057956397.1
GAGAGAGATGATGTGATGAATAGTATATAATCAGAGCAGAGGAAGAAAGGTTGTCCTACTTTTTCATAGCTAGCTTCCATTTCTCCAATTCGCAGCGAACGTTAGGCTTTAGGTCTGATGCATTAAATGCTAGTACTGCCATTTCGCCACGTGTCCAACTCCCATTGGCCAACACTCAAATCATTCTTAGCGGGTTTTCTTCTTCTTCTCCTCCCCTCTCTCTCTCTCATAAAAGCTCCCCTCTCACCTTCTCACTCTCT...

XM_057956396.1
ATAGTATATAATCAGAGCAGAGGAAGAAAGGTTGTCCTACTTTTTCATAGCTAGCTTCCATTTCTCCAATTCGCAGCGAACGTTAGGCTTTAGGTCTGATGCATTAAATGCTAGTACTGCCATTTCGCCACGTGTCCAACTCCCATTGGCCAACACTCAAATCATTCTTAGCGGCTCAATTTTTCAATGCTGTAGGGACCTTGCTTGTCTGCTGCAAAAATGGTGGCCAAGGCTGAGAAATCCGCCGCCGGAGACGCCGC...

CDS

3 records

下载 CDS FASTA

LOC131026519
ATGGTGGCCAAGGCTGAGAAATCCGCCGCCGGAGACGCCGCCGCCGCGCCGTCGAATCACCAGTCACGCCGGAGAAGAGGCTTCAACAAACCATCTTGGCTTCTCTGCGCCATTGCTGATTTGGATGAGAGGATGAAGATGCTGACAAGGAAAACACCTAAAGGAAAGAGTCCTGATAGCTTCTCTGAGAGGGCTAACTCTTACTACCACGAGCGGCCCCAGCTTCTGGCGTTGCTCGATGACTTGTACAACGGGTACCT...

Protein

3 records

下载 Protein FASTA

XP_057812379.1
MVAKAEKSAAGDAAAAPSNHQSRRRRGFNKPSWLLCAIADLDERMKMLTRKTPKGKSPDSFSERANSYYHERPQLLALLDDLYNGYLSLADRYCQVLAKSQQQQQQKPQSRCTSPNPRVKCEDVDEGDSGEVIDSDAESSLSFQPPAVAPVDADMLVADLVMKTVEYDIVENELAAVEKRWSESSRKMELQKNLLDVLESERLILLNDNATLGYRVSALADENKGLASESMFLKRKAAELARCMLKTREDHRVCLLSRKI...

XP_057812380.1
MVAKAEKSAAGDAAAAPSNHQSRRRRGFNKPSWLLCAIADLDERMKMLTRKTPKGKSPDSFSERANSYYHERPQLLALLDDLYNGYLSLADRYCQVLAKSQQQQQQKPQSRCTSPNPRVKCEDVDEGDSGEVIDSDAESSLSFQPPAVAPVDADMLVADLVMKTVEYDIVENELAAVEKRWSESSRKMELQKNLLDVLESERLILLNDNATLGYRVSALADENKGLASESMFLKRKAAELARCMLKTREDHRVCLLSRKI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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