当前解析结果
SmilChr05G000184| 统一新 Gene ID | SmilChr05G000184 |
|---|---|
| 名称 | SmilChr05G000184 |
| 描述 | uncharacterized SmilChr05G000184 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 1486788 - 1488731 / + |
| NCBI Gene ID | LOC130984923 |
|---|---|
| GeneID | 130984923 |
| locus_tag | - |
| NCBI Name | LOC130984923 |
| 原始查询 | SmilChr05G000184 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:815895]; symbol=AT2G14095; hit=AT2G14095; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:815895]; symbol=AT2G14095; hit=AT2G14095; species=arabidopsis; confidence=medium |
| Arabidopsis | AT2G14095 (AT2G14095)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:815895] identity=44.4; qcov=0.663; evalue=1.51e-29; confidence=medium |
| Rice | Os04g0450600- identity=35.3; qcov=0.62; evalue=1.11e-11; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130984923 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057763619.1 |
| 2 | Mitochondrion | 线粒体 | 0.40000 | XP_057763618.1 |
| 3 | Chloroplast membrane | 叶绿体膜 | 0.40000 | XP_057763619.1 |
| 4 | Chloroplast thylakoid | 类囊体 | 0.40000 | XP_057763618.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057763619.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:1486949 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B136,B30,C2 |
Chr5:1486968 |
G |
GC |
1bp_insertion | frameshift_variant | 18 | A14,B11,B12,B122,B20,B26,B42,B43,B8,B85,B87,C20,C35,C5,C57,C67,C70,C87 |
Chr5:1486971 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B112,B66,C21 |
Chr5:1486988 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B67,C84 |
Chr5:1486989 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B15 |
Chr5:1487022 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B2,B67 |
Chr5:1487071 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B127,B77,C31,C65 |
Chr5:1488147 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B48,D6 |
Chr5:1488232 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr5:1488278 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B60 |
Chr5:1488279 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B60 |
Chr5:1488297 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B112,B127,B138,B50 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。