当前解析结果
SmilChr05G000292| 统一新 Gene ID | SmilChr05G000292 |
|---|---|
| 名称 | SmilChr05G000292 |
| 描述 | uncharacterized SmilChr05G000292 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 2233175 - 2234972 / - |
| NCBI Gene ID | LOC130985018 |
|---|---|
| GeneID | 130985018 |
| locus_tag | - |
| NCBI Name | LOC130985018 |
| 原始查询 | SmilChr05G000292 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | secretion-regulating guanine nucleotide exchange factor [Source:NCBI gene (formerly Entrezgene);Acc:825049]; symbol=AT3G58800; hit=AT3G58800; species=arabidopsis; confidence=high |
| 产物 | secretion-regulating guanine nucleotide exchange factor [Source:NCBI gene (formerly Entrezgene);Acc:825049]; symbol=AT3G58800; hit=AT3G58800; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G58800 (AT3G58800)secretion-regulating guanine nucleotide exchange factor [Source:NCBI gene (formerly Entrezgene);Acc:825049] identity=51.2; qcov=0.966; evalue=6.05e-126; confidence=high |
| Rice | Os02g0230200- identity=48.1; qcov=0.838; evalue=1.83e-94; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985018 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 0.80000 | XP_057763744.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.40000 | XP_057763744.1 |
| 3 | Golgi apparatus | 高尔基体 | 0.40000 | XP_057763744.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057763744.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057763744.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:2233511 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B136 |
Chr5:2233547 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A19 |
Chr5:2233658 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A13,B52,D7 |
Chr5:2233717 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr5:2233723 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B21 |
Chr5:2234081 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B12 |
Chr5:2234102 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A6,B120 |
Chr5:2234150 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B15,B47,C56,C65,C76 |
Chr5:2234175 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A6 |
Chr5:2234186 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C44 |
Chr5:2234311 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A7,B52,C34,C9,D3 |
Chr5:2234334 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B108 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。