当前解析结果
SmilChr05G000386| 统一新 Gene ID | SmilChr05G000386 |
|---|---|
| 名称 | SmilChr05G000386 |
| 描述 | uncharacterized SmilChr05G000386 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 2905327 - 2907271 / - |
| NCBI Gene ID | LOC130985105 |
|---|---|
| GeneID | 130985105 |
| locus_tag | - |
| NCBI Name | LOC130985105 |
| 原始查询 | SmilChr05G000386 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2) [Source:NCBI gene (formerly Entrezgene);Acc:827836]; symbol=AT4G20880; hit=AT4G20880; species=arabidopsis; confidence=low |
| 产物 | ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2) [Source:NCBI gene (formerly Entrezgene);Acc:827836]; symbol=AT4G20880; hit=AT4G20880; species=arabidopsis; confidence=low |
| Arabidopsis | AT4G20880 (AT4G20880)ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2) [Source:NCBI gene (formerly Entrezgene);Acc:827836] identity=42; qcov=0.443; evalue=4.23e-25; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985105 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057763860.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057763860.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057763860.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057763860.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057763860.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:2905449 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B60,C12,D3 |
Chr5:2905470 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C28,C30,C58 |
Chr5:2905474 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr5:2905569 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B108 |
Chr5:2905578 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B85,C48 |
Chr5:2905591 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B52,B56,B89,B96,C51 |
Chr5:2905632 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A18 |
Chr5:2905634 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr5:2905770 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A9 |
Chr5:2905799 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B104,B110,C28,C30,C58 |
Chr5:2905892 |
G |
GGA |
2bp_insertion | frameshift_variant | 4 | C17,C19,C56,C86 |
Chr5:2905892 |
G |
GGA |
2bp_insertion | CDS_variant | 4 | C17,C19,C56,C86 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。