当前解析结果
SmilChr05G000621| 统一新 Gene ID | SmilChr05G000621 |
|---|---|
| 名称 | SmilChr05G000621 |
| 描述 | uncharacterized SmilChr05G000621 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 4702476 - 4703165 / + |
| NCBI Gene ID | LOC131024809 |
|---|---|
| GeneID | 131024809 |
| locus_tag | - |
| NCBI Name | LOC131024809 |
| 原始查询 | SmilChr05G000621 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DUF1685 family protein [Source:NCBI gene (formerly Entrezgene);Acc:818876]; symbol=AT2G42760; hit=AT2G42760; species=arabidopsis; confidence=medium |
| 产物 | DUF1685 family protein [Source:NCBI gene (formerly Entrezgene);Acc:818876]; symbol=AT2G42760; hit=AT2G42760; species=arabidopsis; confidence=medium |
| Arabidopsis | AT2G42760 (AT2G42760)DUF1685 family protein [Source:NCBI gene (formerly Entrezgene);Acc:818876] identity=43.3; qcov=0.777; evalue=9.56e-30; confidence=medium |
| Rice | Os06g0550800- identity=31; qcov=1.2; evalue=2.57e-19; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131024809 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.60000 | XP_057810328.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057810328.1 |
| 3 | Cytoplasm | 细胞质 | 0.40000 | XP_057810328.1 |
| 4 | Cell membrane | 细胞膜 | 0.40000 | XP_057810328.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057810328.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:4702493 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C26 |
Chr5:4702527 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A11,B68,B75,D4 |
Chr5:4702640 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C26 |
Chr5:4702655 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A7,B66,B99,C87 |
Chr5:4702685 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A21,B117 |
Chr5:4702841 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr5:4702961 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr5:4702995 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B113,B2 |
Chr5:4703045 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr5:4703063 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C64,C66 |
Chr5:4703143 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A9,B107,B128,B32,B61 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。