当前解析结果
SmilChr05G000654| 统一新 Gene ID | SmilChr05G000654 |
|---|---|
| 名称 | SmilChr05G000654 |
| 描述 | U-box domain-containing protein 4-like |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 4932376 - 4935286 / + |
| NCBI Gene ID | LOC130985366 |
|---|---|
| GeneID | 130985366 |
| locus_tag | - |
| NCBI Name | LOC130985366 |
| 原始查询 | SmilChr05G000654 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | U-box domain-containing protein 4-like |
| 产物 | U-box domain-containing protein 4-like |
| Arabidopsis | AT2G27430 (AT2G27430)ARM repeat superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817288] identity=57.9; qcov=0.858; evalue=1.13e-135; confidence=high |
| Rice | Os05g0573800- identity=44.4; qcov=0.825; evalue=2.2e-74; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985366 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.60000 | XP_057764290.1 |
| 2 | Cell membrane | 细胞膜 | 0.40000 | XP_057764290.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057764290.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057764290.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057764290.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:4932604 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B100,B33 |
Chr5:4932609 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B22,B44 |
Chr5:4932622 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D4 |
Chr5:4932750 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B128,B43,C58 |
Chr5:4932939 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A5,B49,B98 |
Chr5:4934396 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A4 |
Chr5:4934487 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A4,D4 |
Chr5:4934490 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C28 |
Chr5:4934493 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B126,B24,B93,C42 |
Chr5:4934499 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B41 |
Chr5:4934525 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A4,D4 |
Chr5:4934553 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A8 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。